Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLCNKBP51801 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKBP51801 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKBP51801 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKBP51801 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CLCNKBP51801 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CLCNKBP51801 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKBP51801 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
CLCNKBP51801 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCNKBP51801 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
CLCNKBP51801 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.26■□□□□ 0.67
CLCNKBP51801 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLCNKBP51801 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCNKBP51801 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKBP51801 AC011467.2-201ENST00000598425 242 ntBASIC19.26■□□□□ 0.67
CLCNKBP51801 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCNKBP51801 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLCNKBP51801 TP73-AS1-207ENST00000624167 988 ntBASIC19.26■□□□□ 0.67
CLCNKBP51801 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCNKBP51801 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CLCNKBP51801 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLCNKBP51801 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
CLCNKBP51801 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKBP51801 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKBP51801 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCNKBP51801 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCNKBP51801 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKBP51801 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCNKBP51801 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCNKBP51801 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
CLCNKBP51801 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKBP51801 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLCNKBP51801 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKBP51801 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKBP51801 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 AC106795.1-205ENST00000512851 1056 ntBASIC19.25■□□□□ 0.67
CLCNKBP51801 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCNKBP51801 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCNKBP51801 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKBP51801 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCNKBP51801 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
CLCNKBP51801 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLCNKBP51801 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCNKBP51801 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKBP51801 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKBP51801 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKBP51801 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKBP51801 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLCNKBP51801 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CLCNKBP51801 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLCNKBP51801 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CLCNKBP51801 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKBP51801 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKBP51801 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCNKBP51801 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKBP51801 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKBP51801 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLCNKBP51801 AC004408.2-201ENST00000623613 2777 ntBASIC19.24■□□□□ 0.67
CLCNKBP51801 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKBP51801 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKBP51801 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKBP51801 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCNKBP51801 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCNKBP51801 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCNKBP51801 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.24■□□□□ 0.67
CLCNKBP51801 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.24■□□□□ 0.67
CLCNKBP51801 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLCNKBP51801 AL096828.2-201ENST00000567259 1965 ntBASIC19.24■□□□□ 0.67
CLCNKBP51801 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKBP51801 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
CLCNKBP51801 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CLCNKBP51801 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKBP51801 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLCNKBP51801 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CLCNKBP51801 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKBP51801 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CLCNKBP51801 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKBP51801 AC093677.2-201ENST00000600169 1863 ntBASIC19.23■□□□□ 0.67
CLCNKBP51801 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKBP51801 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.23■□□□□ 0.67
CLCNKBP51801 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.23■□□□□ 0.67
CLCNKBP51801 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKBP51801 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCNKBP51801 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKBP51801 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.23■□□□□ 0.67
CLCNKBP51801 AC008608.2-201ENST00000606089 416 ntBASIC19.23■□□□□ 0.67
CLCNKBP51801 AP001269.4-201ENST00000609611 512 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms