Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.93■□□□□ 0.14
CX3CR1P49238 AC009947.2-201ENST00000444014 672 ntBASIC15.93■□□□□ 0.14
CX3CR1P49238 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.93■□□□□ 0.14
CX3CR1P49238 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.93■□□□□ 0.14
CX3CR1P49238 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.93■□□□□ 0.14
CX3CR1P49238 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.93■□□□□ 0.14
CX3CR1P49238 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CX3CR1P49238 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CX3CR1P49238 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.93■□□□□ 0.14
CX3CR1P49238 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CX3CR1P49238 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CX3CR1P49238 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CX3CR1P49238 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CX3CR1P49238 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.92■□□□□ 0.14
CX3CR1P49238 ECEL1P2-202ENST00000465689 757 ntBASIC15.92■□□□□ 0.14
CX3CR1P49238 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.92■□□□□ 0.14
CX3CR1P49238 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.92■□□□□ 0.14
CX3CR1P49238 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.92■□□□□ 0.14
CX3CR1P49238 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CX3CR1P49238 AL512604.3-201ENST00000569583 964 ntBASIC15.92■□□□□ 0.14
CX3CR1P49238 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.92■□□□□ 0.14
CX3CR1P49238 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.92■□□□□ 0.14
CX3CR1P49238 LINC01126-201ENST00000623515 1646 ntBASIC15.92■□□□□ 0.14
CX3CR1P49238 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 GNAS-203ENST00000306120 1878 ntBASIC15.92■□□□□ 0.14
CX3CR1P49238 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CX3CR1P49238 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.92■□□□□ 0.14
CX3CR1P49238 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.92■□□□□ 0.14
CX3CR1P49238 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CX3CR1P49238 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CX3CR1P49238 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.91■□□□□ 0.14
CX3CR1P49238 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.91■□□□□ 0.14
CX3CR1P49238 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CX3CR1P49238 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CX3CR1P49238 AC134043.2-201ENST00000624206 2238 ntBASIC15.91■□□□□ 0.14
CX3CR1P49238 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.91■□□□□ 0.14
CX3CR1P49238 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.91■□□□□ 0.14
CX3CR1P49238 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.91■□□□□ 0.14
CX3CR1P49238 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.91■□□□□ 0.14
CX3CR1P49238 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.91■□□□□ 0.14
CX3CR1P49238 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CX3CR1P49238 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.91■□□□□ 0.14
CX3CR1P49238 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.91■□□□□ 0.14
CX3CR1P49238 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.91■□□□□ 0.14
CX3CR1P49238 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CX3CR1P49238 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.91■□□□□ 0.14
CX3CR1P49238 AC024243.1-201ENST00000609234 778 ntBASIC15.91■□□□□ 0.14
CX3CR1P49238 FAM87A-204ENST00000613235 858 ntBASIC15.91■□□□□ 0.14
CX3CR1P49238 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CX3CR1P49238 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CX3CR1P49238 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CX3CR1P49238 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.91■□□□□ 0.14
CX3CR1P49238 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 AC093010.1-201ENST00000473625 1624 ntBASIC15.9■□□□□ 0.14
CX3CR1P49238 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.9■□□□□ 0.14
CX3CR1P49238 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms