Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NAPSB-206ENST00000562112 1266 ntBASIC19.26■□□□□ 0.67
SSR1P43307 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.26■□□□□ 0.67
SSR1P43307 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.26■□□□□ 0.67
SSR1P43307 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.26■□□□□ 0.67
SSR1P43307 AC009102.3-201ENST00000623118 1491 ntBASIC19.26■□□□□ 0.67
SSR1P43307 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SSR1P43307 KRT8P9-201ENST00000558927 1449 ntBASIC19.25■□□□□ 0.67
SSR1P43307 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.25■□□□□ 0.67
SSR1P43307 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.25■□□□□ 0.67
SSR1P43307 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SSR1P43307 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SSR1P43307 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SSR1P43307 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.25■□□□□ 0.67
SSR1P43307 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 CYP2D8P-201ENST00000433633 1490 ntBASIC19.25■□□□□ 0.67
SSR1P43307 INGX-201ENST00000359239 846 ntBASIC19.25■□□□□ 0.67
SSR1P43307 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SSR1P43307 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.25■□□□□ 0.67
SSR1P43307 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.25■□□□□ 0.67
SSR1P43307 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.25■□□□□ 0.67
SSR1P43307 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.25■□□□□ 0.67
SSR1P43307 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SSR1P43307 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.25■□□□□ 0.67
SSR1P43307 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
SSR1P43307 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSR1P43307 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SSR1P43307 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR1P43307 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSR1P43307 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSR1P43307 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.24■□□□□ 0.67
SSR1P43307 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSR1P43307 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SSR1P43307 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSR1P43307 PCDHB18P-201ENST00000524813 2368 ntBASIC19.24■□□□□ 0.67
SSR1P43307 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.24■□□□□ 0.67
SSR1P43307 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.24■□□□□ 0.67
SSR1P43307 AC128688.1-201ENST00000487626 519 ntBASIC19.24■□□□□ 0.67
SSR1P43307 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.24■□□□□ 0.67
SSR1P43307 AC112497.1-201ENST00000624824 639 ntBASIC19.24■□□□□ 0.67
SSR1P43307 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR1P43307 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SSR1P43307 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SSR1P43307 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SSR1P43307 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSR1P43307 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.24■□□□□ 0.67
SSR1P43307 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSR1P43307 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR1P43307 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.23■□□□□ 0.67
SSR1P43307 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.23■□□□□ 0.67
SSR1P43307 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.23■□□□□ 0.67
SSR1P43307 AC067852.2-201ENST00000590513 2313 ntBASIC19.23■□□□□ 0.67
SSR1P43307 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 MMP23A-201ENST00000234610 1017 ntBASIC19.23■□□□□ 0.67
SSR1P43307 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 MIR149-201ENST00000384879 89 ntBASIC19.23■□□□□ 0.67
SSR1P43307 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.23■□□□□ 0.67
SSR1P43307 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SSR1P43307 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.23■□□□□ 0.67
SSR1P43307 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.23■□□□□ 0.67
SSR1P43307 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 EGLN1P1-201ENST00000531623 762 ntBASIC19.23■□□□□ 0.67
SSR1P43307 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.23■□□□□ 0.67
SSR1P43307 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.23■□□□□ 0.67
SSR1P43307 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SSR1P43307 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.23■□□□□ 0.67
SSR1P43307 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSR1P43307 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.23■□□□□ 0.67
SSR1P43307 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 SDHAP2-201ENST00000455183 2001 ntBASIC19.22■□□□□ 0.67
SSR1P43307 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR1P43307 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms