Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLC1A3P43003 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC1A3P43003 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC1A3P43003 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC1A3P43003 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 AC113347.1-201ENST00000413321 391 ntBASIC16.66■□□□□ 0.26
SLC1A3P43003 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC1A3P43003 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC1A3P43003 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC1A3P43003 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC1A3P43003 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC1A3P43003 MIR3917-201ENST00000580971 93 ntBASIC16.66■□□□□ 0.26
SLC1A3P43003 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC1A3P43003 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLC1A3P43003 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC1A3P43003 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC1A3P43003 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC1A3P43003 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A3P43003 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A3P43003 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A3P43003 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A3P43003 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A3P43003 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SLC1A3P43003 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SLC1A3P43003 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A3P43003 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC1A3P43003 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC1A3P43003 AC010203.1-204ENST00000548782 407 ntBASIC16.65■□□□□ 0.26
SLC1A3P43003 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC1A3P43003 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC1A3P43003 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 AL031432.5-201ENST00000641059 760 ntBASIC16.65■□□□□ 0.26
SLC1A3P43003 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC1A3P43003 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC1A3P43003 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC1A3P43003 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A3P43003 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SLC1A3P43003 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC1A3P43003 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
SLC1A3P43003 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLC1A3P43003 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A3P43003 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A3P43003 PHGDH-209ENST00000641074 1780 ntBASIC16.64■□□□□ 0.25
SLC1A3P43003 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A3P43003 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A3P43003 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 AC211429.1-201ENST00000415277 523 ntBASIC16.64■□□□□ 0.25
SLC1A3P43003 AL137013.1-201ENST00000432946 1228 ntBASIC16.64■□□□□ 0.25
SLC1A3P43003 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC1A3P43003 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.64■□□□□ 0.25
SLC1A3P43003 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A3P43003 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 AC140113.3-201ENST00000605663 199 ntBASIC16.64■□□□□ 0.25
SLC1A3P43003 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.64■□□□□ 0.25
SLC1A3P43003 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A3P43003 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SLC1A3P43003 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC1A3P43003 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SLC1A3P43003 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A3P43003 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms