Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.22■■□□□ 1.15
PDE6BP35913 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PDE6BP35913 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
PDE6BP35913 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.21■■□□□ 1.15
PDE6BP35913 CFL1-202ENST00000524553 860 ntTSL 2 BASIC22.21■■□□□ 1.15
PDE6BP35913 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.21■■□□□ 1.15
PDE6BP35913 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.21■■□□□ 1.15
PDE6BP35913 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
PDE6BP35913 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PDE6BP35913 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PDE6BP35913 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.21■■□□□ 1.15
PDE6BP35913 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.21■■□□□ 1.15
PDE6BP35913 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PDE6BP35913 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PDE6BP35913 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE6BP35913 AL499627.1-201ENST00000569373 2188 ntBASIC22.21■■□□□ 1.15
PDE6BP35913 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PDE6BP35913 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PDE6BP35913 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PDE6BP35913 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.2■■□□□ 1.14
PDE6BP35913 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.2■■□□□ 1.14
PDE6BP35913 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC22.2■■□□□ 1.14
PDE6BP35913 AC254562.1-201ENST00000417586 456 ntBASIC22.2■■□□□ 1.14
PDE6BP35913 AC096633.1-201ENST00000422446 749 ntBASIC22.2■■□□□ 1.14
PDE6BP35913 RFPL4AP1-201ENST00000530883 850 ntBASIC22.2■■□□□ 1.14
PDE6BP35913 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
PDE6BP35913 MIR3197-201ENST00000582241 73 ntBASIC22.2■■□□□ 1.14
PDE6BP35913 MIR4469-201ENST00000583919 79 ntBASIC22.2■■□□□ 1.14
PDE6BP35913 AC004817.3-201ENST00000602957 2129 ntBASIC22.2■■□□□ 1.14
PDE6BP35913 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
PDE6BP35913 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.2■■□□□ 1.14
PDE6BP35913 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PDE6BP35913 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.2■■□□□ 1.14
PDE6BP35913 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE6BP35913 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PDE6BP35913 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PDE6BP35913 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDE6BP35913 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PDE6BP35913 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE6BP35913 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE6BP35913 SPDYE21P-201ENST00000413323 827 ntBASIC22.19■■□□□ 1.14
PDE6BP35913 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.19■■□□□ 1.14
PDE6BP35913 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC22.19■■□□□ 1.14
PDE6BP35913 CYMP-203ENST00000474680 1263 ntBASIC22.19■■□□□ 1.14
PDE6BP35913 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC22.19■■□□□ 1.14
PDE6BP35913 AL589182.2-201ENST00000619332 1049 ntBASIC22.19■■□□□ 1.14
PDE6BP35913 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.19■■□□□ 1.14
PDE6BP35913 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE6BP35913 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE6BP35913 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PDE6BP35913 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE6BP35913 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE6BP35913 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.18■■□□□ 1.14
PDE6BP35913 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PDE6BP35913 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.18■■□□□ 1.14
PDE6BP35913 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PDE6BP35913 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC22.18■■□□□ 1.14
PDE6BP35913 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.18■■□□□ 1.14
PDE6BP35913 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PDE6BP35913 CRYGEP-201ENST00000412192 528 ntBASIC22.18■■□□□ 1.14
PDE6BP35913 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PDE6BP35913 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDE6BP35913 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE6BP35913 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PDE6BP35913 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.18■■□□□ 1.14
PDE6BP35913 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.18■■□□□ 1.14
PDE6BP35913 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.18■■□□□ 1.14
PDE6BP35913 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PDE6BP35913 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.18■■□□□ 1.14
PDE6BP35913 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.18■■□□□ 1.14
PDE6BP35913 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PDE6BP35913 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDE6BP35913 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
PDE6BP35913 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.17■■□□□ 1.14
PDE6BP35913 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDE6BP35913 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms