Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT2P35908 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 AL133373.2-201ENST00000623187 2828 ntBASIC20.75■□□□□ 0.91
KRT2P35908 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KRT2P35908 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 SLC25A6P5-201ENST00000435663 894 ntBASIC20.75■□□□□ 0.91
KRT2P35908 SPDYE13P-201ENST00000445314 798 ntBASIC20.75■□□□□ 0.91
KRT2P35908 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.75■□□□□ 0.91
KRT2P35908 AP003733.1-201ENST00000491725 852 ntBASIC20.75■□□□□ 0.91
KRT2P35908 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.75■□□□□ 0.91
KRT2P35908 AL049597.2-201ENST00000565575 961 ntBASIC20.75■□□□□ 0.91
KRT2P35908 AC004263.2-201ENST00000617183 678 ntBASIC20.75■□□□□ 0.91
KRT2P35908 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
KRT2P35908 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT2P35908 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
KRT2P35908 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
KRT2P35908 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KRT2P35908 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT2P35908 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.74■□□□□ 0.91
KRT2P35908 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.74■□□□□ 0.91
KRT2P35908 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
KRT2P35908 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.74■□□□□ 0.91
KRT2P35908 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT2P35908 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 AC068880.1-201ENST00000507289 2297 ntBASIC20.74■□□□□ 0.91
KRT2P35908 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KRT2P35908 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT2P35908 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KRT2P35908 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.73■□□□□ 0.91
KRT2P35908 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT2P35908 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT2P35908 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 IGHGP-201ENST00000390555 1178 ntBASIC20.73■□□□□ 0.91
KRT2P35908 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KRT2P35908 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT2P35908 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.73■□□□□ 0.91
KRT2P35908 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
KRT2P35908 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT2P35908 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT2P35908 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KRT2P35908 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT2P35908 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KRT2P35908 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KRT2P35908 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT2P35908 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KRT2P35908 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT2P35908 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT2P35908 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT2P35908 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
KRT2P35908 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms