Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SOX6P35712 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SOX6P35712 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX6P35712 AC068587.6-202ENST00000641839 5619 ntBASIC16.25■□□□□ 0.19
SOX6P35712 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
SOX6P35712 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX6P35712 SLC29A4P1-201ENST00000398760 971 ntBASIC16.24■□□□□ 0.19
SOX6P35712 AC073210.2-201ENST00000430369 194 ntBASIC16.24■□□□□ 0.19
SOX6P35712 NCF1B-203ENST00000435988 1254 ntBASIC16.24■□□□□ 0.19
SOX6P35712 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX6P35712 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX6P35712 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.24■□□□□ 0.19
SOX6P35712 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.24■□□□□ 0.19
SOX6P35712 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX6P35712 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.24■□□□□ 0.19
SOX6P35712 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX6P35712 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.24■□□□□ 0.19
SOX6P35712 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX6P35712 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 MYLKP1-201ENST00000509077 1580 ntBASIC16.24■□□□□ 0.19
SOX6P35712 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX6P35712 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.24■□□□□ 0.19
SOX6P35712 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SOX6P35712 UBALD1-205ENST00000590891 2641 ntBASIC16.24■□□□□ 0.19
SOX6P35712 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SOX6P35712 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SOX6P35712 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SOX6P35712 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 AL357033.4-201ENST00000617703 1807 ntBASIC16.24■□□□□ 0.19
SOX6P35712 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SOX6P35712 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX6P35712 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX6P35712 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SOX6P35712 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
SOX6P35712 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 AC010980.2-201ENST00000587099 1412 ntBASIC16.23■□□□□ 0.19
SOX6P35712 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX6P35712 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX6P35712 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.23■□□□□ 0.19
SOX6P35712 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.23■□□□□ 0.19
SOX6P35712 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.23■□□□□ 0.19
SOX6P35712 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX6P35712 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX6P35712 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.23■□□□□ 0.19
SOX6P35712 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
SOX6P35712 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
SOX6P35712 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX6P35712 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX6P35712 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SOX6P35712 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX6P35712 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX6P35712 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX6P35712 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SOX6P35712 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.22■□□□□ 0.19
SOX6P35712 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.22■□□□□ 0.19
SOX6P35712 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX6P35712 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.22■□□□□ 0.19
SOX6P35712 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.22■□□□□ 0.19
SOX6P35712 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
SOX6P35712 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX6P35712 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX6P35712 CICP6-201ENST00000457191 2729 ntBASIC16.22■□□□□ 0.19
SOX6P35712 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms