Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.31■□□□□ 0.52
RPA3P35244 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RPA3P35244 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RPA3P35244 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.31■□□□□ 0.52
RPA3P35244 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.31■□□□□ 0.52
RPA3P35244 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
RPA3P35244 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.31■□□□□ 0.52
RPA3P35244 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.31■□□□□ 0.52
RPA3P35244 AD000864.1-201ENST00000624076 2295 ntBASIC18.31■□□□□ 0.52
RPA3P35244 AC022211.2-201ENST00000585075 2527 ntBASIC18.31■□□□□ 0.52
RPA3P35244 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RPA3P35244 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.31■□□□□ 0.52
RPA3P35244 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.31■□□□□ 0.52
RPA3P35244 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RPA3P35244 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RPA3P35244 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.31■□□□□ 0.52
RPA3P35244 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RPA3P35244 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RPA3P35244 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RPA3P35244 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
RPA3P35244 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPA3P35244 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.3■□□□□ 0.52
RPA3P35244 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RPA3P35244 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RPA3P35244 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RPA3P35244 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.3■□□□□ 0.52
RPA3P35244 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.3■□□□□ 0.52
RPA3P35244 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.3■□□□□ 0.52
RPA3P35244 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.3■□□□□ 0.52
RPA3P35244 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.3■□□□□ 0.52
RPA3P35244 NAPSB-206ENST00000562112 1266 ntBASIC18.3■□□□□ 0.52
RPA3P35244 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
RPA3P35244 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 BCL2-203ENST00000589955 5011 ntBASIC18.3■□□□□ 0.52
RPA3P35244 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPA3P35244 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.3■□□□□ 0.52
RPA3P35244 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPA3P35244 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.3■□□□□ 0.52
RPA3P35244 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPA3P35244 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPA3P35244 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.29■□□□□ 0.52
RPA3P35244 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.29■□□□□ 0.52
RPA3P35244 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.29■□□□□ 0.52
RPA3P35244 CA15P1-201ENST00000481698 905 ntBASIC18.29■□□□□ 0.52
RPA3P35244 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.29■□□□□ 0.52
RPA3P35244 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RPA3P35244 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.29■□□□□ 0.52
RPA3P35244 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RPA3P35244 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RPA3P35244 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.29■□□□□ 0.52
RPA3P35244 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPA3P35244 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RPA3P35244 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
RPA3P35244 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPA3P35244 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPA3P35244 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPA3P35244 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPA3P35244 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPA3P35244 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPA3P35244 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.28■□□□□ 0.52
RPA3P35244 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPA3P35244 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms