Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CTNNA1P35221 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTNNA1P35221 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNNA1P35221 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CTNNA1P35221 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNNA1P35221 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.12■□□□□ 0.65
CTNNA1P35221 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTNNA1P35221 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CTNNA1P35221 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CTNNA1P35221 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNNA1P35221 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTNNA1P35221 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNNA1P35221 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNNA1P35221 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNNA1P35221 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
CTNNA1P35221 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.12■□□□□ 0.65
CTNNA1P35221 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.12■□□□□ 0.65
CTNNA1P35221 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.12■□□□□ 0.65
CTNNA1P35221 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.12■□□□□ 0.65
CTNNA1P35221 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTNNA1P35221 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNNA1P35221 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CTNNA1P35221 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.12■□□□□ 0.65
CTNNA1P35221 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.12■□□□□ 0.65
CTNNA1P35221 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTNNA1P35221 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 AC006116.8-202ENST00000587620 1550 ntBASIC19.11■□□□□ 0.65
CTNNA1P35221 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CTNNA1P35221 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.11■□□□□ 0.65
CTNNA1P35221 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.11■□□□□ 0.65
CTNNA1P35221 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNNA1P35221 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CTNNA1P35221 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNNA1P35221 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNNA1P35221 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNNA1P35221 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CTNNA1P35221 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CTNNA1P35221 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.1■□□□□ 0.65
CTNNA1P35221 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.1■□□□□ 0.65
CTNNA1P35221 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
CTNNA1P35221 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.1■□□□□ 0.65
CTNNA1P35221 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.1■□□□□ 0.65
CTNNA1P35221 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.1■□□□□ 0.65
CTNNA1P35221 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CTNNA1P35221 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.1■□□□□ 0.65
CTNNA1P35221 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CTNNA1P35221 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.1■□□□□ 0.65
CTNNA1P35221 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNNA1P35221 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CTNNA1P35221 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CTNNA1P35221 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.1■□□□□ 0.65
CTNNA1P35221 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.1■□□□□ 0.65
CTNNA1P35221 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTNNA1P35221 AL024508.2-201ENST00000607749 1894 ntBASIC19.09■□□□□ 0.65
CTNNA1P35221 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTNNA1P35221 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTNNA1P35221 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.09■□□□□ 0.65
CTNNA1P35221 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 AL645608.8-201ENST00000606034 2086 ntBASIC19.09■□□□□ 0.65
CTNNA1P35221 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.09■□□□□ 0.65
CTNNA1P35221 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTNNA1P35221 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms