Protein–RNA interactions for Protein: P32302

CXCR5, C-X-C chemokine receptor type 5, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR5P32302 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR5P32302 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR5P32302 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR5P32302 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR5P32302 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR5P32302 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR5P32302 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR5P32302 MFAP1P1-201ENST00000442257 1255 ntBASIC19.13■□□□□ 0.65
CXCR5P32302 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCR5P32302 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCR5P32302 RPPH1-201ENST00000516869 333 ntBASIC19.13■□□□□ 0.65
CXCR5P32302 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCR5P32302 SLC25A1P4-201ENST00000567977 778 ntBASIC19.13■□□□□ 0.65
CXCR5P32302 MIR3180-5-201ENST00000583743 153 ntBASIC19.13■□□□□ 0.65
CXCR5P32302 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.13■□□□□ 0.65
CXCR5P32302 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCR5P32302 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR5P32302 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 AC011676.5-201ENST00000624864 2660 ntBASIC19.13■□□□□ 0.65
CXCR5P32302 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CXCR5P32302 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR5P32302 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CXCR5P32302 PKD1P1-201ENST00000458669 6805 ntBASIC19.13■□□□□ 0.65
CXCR5P32302 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.12■□□□□ 0.65
CXCR5P32302 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CXCR5P32302 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CXCR5P32302 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.12■□□□□ 0.65
CXCR5P32302 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR5P32302 AL023806.1-201ENST00000603994 1649 ntBASIC19.12■□□□□ 0.65
CXCR5P32302 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.12■□□□□ 0.65
CXCR5P32302 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR5P32302 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR5P32302 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.12■□□□□ 0.65
CXCR5P32302 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.12■□□□□ 0.65
CXCR5P32302 RARRES2P10-201ENST00000564312 460 ntBASIC19.12■□□□□ 0.65
CXCR5P32302 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.12■□□□□ 0.65
CXCR5P32302 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.12■□□□□ 0.65
CXCR5P32302 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR5P32302 TNRC18P3-201ENST00000441896 2691 ntBASIC19.12■□□□□ 0.65
CXCR5P32302 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR5P32302 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 NKILA-202ENST00000614771 2598 ntBASIC19.11■□□□□ 0.65
CXCR5P32302 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.11■□□□□ 0.65
CXCR5P32302 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.11■□□□□ 0.65
CXCR5P32302 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
CXCR5P32302 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CXCR5P32302 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.11■□□□□ 0.65
CXCR5P32302 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR5P32302 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.1■□□□□ 0.65
CXCR5P32302 LINC00602-201ENST00000629776 2065 ntBASIC19.1■□□□□ 0.65
CXCR5P32302 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.1■□□□□ 0.65
CXCR5P32302 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CXCR5P32302 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CXCR5P32302 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 ID1-201ENST00000376105 1233 ntBASIC19.1■□□□□ 0.65
CXCR5P32302 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.1■□□□□ 0.65
CXCR5P32302 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.1■□□□□ 0.65
CXCR5P32302 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.1■□□□□ 0.65
CXCR5P32302 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.1■□□□□ 0.65
CXCR5P32302 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CXCR5P32302 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.1■□□□□ 0.65
CXCR5P32302 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.1■□□□□ 0.65
CXCR5P32302 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.1■□□□□ 0.65
CXCR5P32302 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.1■□□□□ 0.65
CXCR5P32302 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CXCR5P32302 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CXCR5P32302 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CXCR5P32302 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.1■□□□□ 0.65
CXCR5P32302 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.1■□□□□ 0.65
CXCR5P32302 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR5P32302 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms