Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC008687.5-201ENST00000593746 558 ntBASIC18.42■□□□□ 0.54
NFKB1P19838 AC024563.2-201ENST00000603282 481 ntBASIC18.42■□□□□ 0.54
NFKB1P19838 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.42■□□□□ 0.54
NFKB1P19838 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NFKB1P19838 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.42■□□□□ 0.54
NFKB1P19838 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
NFKB1P19838 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NFKB1P19838 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.41■□□□□ 0.54
NFKB1P19838 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NFKB1P19838 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.41■□□□□ 0.54
NFKB1P19838 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NFKB1P19838 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NFKB1P19838 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.41■□□□□ 0.54
NFKB1P19838 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 SLC25A6P5-201ENST00000435663 894 ntBASIC18.41■□□□□ 0.54
NFKB1P19838 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.41■□□□□ 0.54
NFKB1P19838 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.41■□□□□ 0.54
NFKB1P19838 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.41■□□□□ 0.54
NFKB1P19838 LINC00602-201ENST00000629776 2065 ntBASIC18.41■□□□□ 0.54
NFKB1P19838 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NFKB1P19838 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NFKB1P19838 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
NFKB1P19838 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
NFKB1P19838 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NFKB1P19838 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
NFKB1P19838 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.4■□□□□ 0.54
NFKB1P19838 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.4■□□□□ 0.54
NFKB1P19838 HLA-F-220ENST00000434407 884 ntBASIC18.4■□□□□ 0.54
NFKB1P19838 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.4■□□□□ 0.54
NFKB1P19838 HOMER2P1-201ENST00000455653 964 ntBASIC18.4■□□□□ 0.54
NFKB1P19838 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.4■□□□□ 0.54
NFKB1P19838 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.4■□□□□ 0.54
NFKB1P19838 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NFKB1P19838 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.4■□□□□ 0.54
NFKB1P19838 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NFKB1P19838 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NFKB1P19838 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NFKB1P19838 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
NFKB1P19838 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NFKB1P19838 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NFKB1P19838 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NFKB1P19838 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NFKB1P19838 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
NFKB1P19838 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.39■□□□□ 0.53
NFKB1P19838 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NFKB1P19838 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NFKB1P19838 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms