Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.15□□□□□ -0.14
CD28P10747 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.15□□□□□ -0.14
CD28P10747 TSPY12P-201ENST00000421279 868 ntBASIC14.15□□□□□ -0.14
CD28P10747 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.15□□□□□ -0.14
CD28P10747 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.15□□□□□ -0.14
CD28P10747 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.15□□□□□ -0.14
CD28P10747 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.15□□□□□ -0.14
CD28P10747 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 AC008687.5-201ENST00000593746 558 ntBASIC14.15□□□□□ -0.14
CD28P10747 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.15□□□□□ -0.14
CD28P10747 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CD28P10747 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CD28P10747 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.15□□□□□ -0.14
CD28P10747 AC098818.2-201ENST00000564925 2320 ntBASIC14.15□□□□□ -0.14
CD28P10747 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.14□□□□□ -0.15
CD28P10747 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CD28P10747 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 SDHAP2-201ENST00000455183 2001 ntBASIC14.14□□□□□ -0.15
CD28P10747 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CD28P10747 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CD28P10747 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CD28P10747 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 MRPL3P1-201ENST00000400109 1033 ntBASIC14.14□□□□□ -0.15
CD28P10747 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 SAPCD2P3-201ENST00000455031 850 ntBASIC14.14□□□□□ -0.15
CD28P10747 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.14□□□□□ -0.15
CD28P10747 AC096582.2-201ENST00000510860 516 ntBASIC14.14□□□□□ -0.15
CD28P10747 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.14□□□□□ -0.15
CD28P10747 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
CD28P10747 AL499627.1-201ENST00000569373 2188 ntBASIC14.14□□□□□ -0.15
CD28P10747 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CD28P10747 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.14□□□□□ -0.15
CD28P10747 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.14□□□□□ -0.15
CD28P10747 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD28P10747 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
CD28P10747 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.13□□□□□ -0.15
CD28P10747 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CD28P10747 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 POM121L3P-201ENST00000419331 1163 ntBASIC14.13□□□□□ -0.15
CD28P10747 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 AC113404.2-201ENST00000507884 177 ntBASIC14.13□□□□□ -0.15
CD28P10747 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.13□□□□□ -0.15
CD28P10747 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.13□□□□□ -0.15
CD28P10747 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CD28P10747 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.13□□□□□ -0.15
CD28P10747 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.13□□□□□ -0.15
CD28P10747 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.13□□□□□ -0.15
CD28P10747 SLC25A6P4-201ENST00000586535 553 ntBASIC14.13□□□□□ -0.15
CD28P10747 BNIP3P18-201ENST00000593976 575 ntBASIC14.13□□□□□ -0.15
CD28P10747 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.13□□□□□ -0.15
CD28P10747 AL591684.3-201ENST00000605187 298 ntBASIC14.13□□□□□ -0.15
CD28P10747 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CD28P10747 REXO1L6P-202ENST00000619970 1078 ntBASIC14.13□□□□□ -0.15
CD28P10747 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.13□□□□□ -0.15
CD28P10747 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD28P10747 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.13□□□□□ -0.15
CD28P10747 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms