Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19■□□□□ 0.63
RARAP10276 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19■□□□□ 0.63
RARAP10276 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RARAP10276 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RARAP10276 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19■□□□□ 0.63
RARAP10276 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RARAP10276 AP000523.1-201ENST00000398242 1049 ntBASIC19■□□□□ 0.63
RARAP10276 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19■□□□□ 0.63
RARAP10276 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RARAP10276 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RARAP10276 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19■□□□□ 0.63
RARAP10276 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19■□□□□ 0.63
RARAP10276 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19■□□□□ 0.63
RARAP10276 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19■□□□□ 0.63
RARAP10276 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RARAP10276 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RARAP10276 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.99■□□□□ 0.63
RARAP10276 AC006116.8-202ENST00000587620 1550 ntBASIC18.99■□□□□ 0.63
RARAP10276 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.99■□□□□ 0.63
RARAP10276 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.99■□□□□ 0.63
RARAP10276 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.99■□□□□ 0.63
RARAP10276 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.99■□□□□ 0.63
RARAP10276 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RARAP10276 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.99■□□□□ 0.63
RARAP10276 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.99■□□□□ 0.63
RARAP10276 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.99■□□□□ 0.63
RARAP10276 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.99■□□□□ 0.63
RARAP10276 AC092865.7-201ENST00000641832 219 ntBASIC18.99■□□□□ 0.63
RARAP10276 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
RARAP10276 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RARAP10276 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
RARAP10276 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RARAP10276 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RARAP10276 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.99■□□□□ 0.63
RARAP10276 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARAP10276 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RARAP10276 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.98■□□□□ 0.63
RARAP10276 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 AC009053.2-201ENST00000563701 2365 ntBASIC18.98■□□□□ 0.63
RARAP10276 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RARAP10276 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.98■□□□□ 0.63
RARAP10276 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.98■□□□□ 0.63
RARAP10276 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.98■□□□□ 0.63
RARAP10276 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.98■□□□□ 0.63
RARAP10276 GCSHP2-201ENST00000560971 527 ntBASIC18.98■□□□□ 0.63
RARAP10276 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RARAP10276 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.98■□□□□ 0.63
RARAP10276 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.98■□□□□ 0.63
RARAP10276 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.98■□□□□ 0.63
RARAP10276 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RARAP10276 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RARAP10276 AL023973.1-201ENST00000624619 620 ntBASIC18.98■□□□□ 0.63
RARAP10276 AL157888.1-201ENST00000631930 593 ntBASIC18.98■□□□□ 0.63
RARAP10276 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RARAP10276 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.98■□□□□ 0.63
RARAP10276 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.98■□□□□ 0.63
RARAP10276 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RARAP10276 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARAP10276 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.97■□□□□ 0.63
RARAP10276 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RARAP10276 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARAP10276 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.97■□□□□ 0.63
RARAP10276 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RARAP10276 AC093010.1-201ENST00000473625 1624 ntBASIC18.97■□□□□ 0.63
RARAP10276 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARAP10276 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms