Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 LINC01711-201ENST00000598340 967 ntBASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 IGHV3-41-201ENST00000613121 348 ntBASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCNYL3P0C7X3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 AC090164.3-201ENST00000610780 2143 ntBASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 AC004870.1-201ENST00000315132 882 ntBASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 LINC00265-3P-201ENST00000447588 903 ntBASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 AP000867.3-201ENST00000524675 377 ntBASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 RNF126P1-202ENST00000569893 925 ntBASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 RN7SL510P-201ENST00000581311 263 ntBASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 AC005332.3-201ENST00000589904 676 ntBASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 AC009113.1-201ENST00000570267 2443 ntBASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNYL3P0C7X3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 DRAXINP1-201ENST00000437611 948 ntBASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 AL121772.3-201ENST00000610840 674 ntBASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNYL3P0C7X3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCNYL3P0C7X3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCNYL3P0C7X3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms