Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 AL355075.4-201ENST00000554988 638 ntBASIC19.59■□□□□ 0.73
CCDC172P0C7W6 AC008687.5-201ENST00000593746 558 ntBASIC19.59■□□□□ 0.73
CCDC172P0C7W6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 AC093010.1-201ENST00000473625 1624 ntBASIC19.58■□□□□ 0.73
CCDC172P0C7W6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC172P0C7W6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 MIR4497-201ENST00000583208 89 ntBASIC19.58■□□□□ 0.72
CCDC172P0C7W6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 AL513477.1-201ENST00000602865 2407 ntBASIC19.58■□□□□ 0.72
CCDC172P0C7W6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC172P0C7W6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 NAPSB-206ENST00000562112 1266 ntBASIC19.57■□□□□ 0.72
CCDC172P0C7W6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 AC134043.2-201ENST00000624206 2238 ntBASIC19.57■□□□□ 0.72
CCDC172P0C7W6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC172P0C7W6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 AC010240.3-201ENST00000607688 395 ntBASIC19.56■□□□□ 0.72
CCDC172P0C7W6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC172P0C7W6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms