Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP2P08253 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.21■□□□□ 0.51
MMP2P08253 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP2P08253 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP2P08253 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP2P08253 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.21■□□□□ 0.51
MMP2P08253 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP2P08253 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP2P08253 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP2P08253 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP2P08253 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
MMP2P08253 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP2P08253 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
MMP2P08253 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
MMP2P08253 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
MMP2P08253 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.2■□□□□ 0.5
MMP2P08253 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.2■□□□□ 0.5
MMP2P08253 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 PCED1CP-201ENST00000419887 785 ntBASIC18.2■□□□□ 0.5
MMP2P08253 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.2■□□□□ 0.5
MMP2P08253 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.2■□□□□ 0.5
MMP2P08253 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
MMP2P08253 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.2■□□□□ 0.5
MMP2P08253 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
MMP2P08253 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.2■□□□□ 0.5
MMP2P08253 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.2■□□□□ 0.5
MMP2P08253 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MMP2P08253 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.19■□□□□ 0.5
MMP2P08253 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.19■□□□□ 0.5
MMP2P08253 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.19■□□□□ 0.5
MMP2P08253 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.19■□□□□ 0.5
MMP2P08253 KRT8P47-201ENST00000604727 1398 ntBASIC18.19■□□□□ 0.5
MMP2P08253 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.19■□□□□ 0.5
MMP2P08253 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.19■□□□□ 0.5
MMP2P08253 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.19■□□□□ 0.5
MMP2P08253 AC068472.1-201ENST00000474589 881 ntBASIC18.19■□□□□ 0.5
MMP2P08253 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.19■□□□□ 0.5
MMP2P08253 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.19■□□□□ 0.5
MMP2P08253 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.19■□□□□ 0.5
MMP2P08253 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
MMP2P08253 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MMP2P08253 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 AC067852.2-201ENST00000590513 2313 ntBASIC18.18■□□□□ 0.5
MMP2P08253 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
MMP2P08253 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.18■□□□□ 0.5
MMP2P08253 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MMP2P08253 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.18■□□□□ 0.5
MMP2P08253 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.18■□□□□ 0.5
MMP2P08253 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
MMP2P08253 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 ARMC10P1-201ENST00000313754 855 ntBASIC18.18■□□□□ 0.5
MMP2P08253 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MMP2P08253 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.18■□□□□ 0.5
MMP2P08253 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.18■□□□□ 0.5
MMP2P08253 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.18■□□□□ 0.5
MMP2P08253 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.18■□□□□ 0.5
MMP2P08253 RN7SL606P-201ENST00000472779 293 ntBASIC18.18■□□□□ 0.5
MMP2P08253 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.18■□□□□ 0.5
MMP2P08253 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.18■□□□□ 0.5
MMP2P08253 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.18■□□□□ 0.5
MMP2P08253 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP2P08253 AL358472.4-201ENST00000633140 710 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms