Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.51■□□□□ 0.39
LDLRP01130 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.51■□□□□ 0.39
LDLRP01130 AL121956.5-201ENST00000625261 221 ntBASIC17.51■□□□□ 0.39
LDLRP01130 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LDLRP01130 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.51■□□□□ 0.39
LDLRP01130 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
LDLRP01130 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRP01130 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LDLRP01130 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LDLRP01130 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRP01130 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LDLRP01130 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.5■□□□□ 0.39
LDLRP01130 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LDLRP01130 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.5■□□□□ 0.39
LDLRP01130 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.5■□□□□ 0.39
LDLRP01130 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.5■□□□□ 0.39
LDLRP01130 AC009053.2-201ENST00000563701 2365 ntBASIC17.5■□□□□ 0.39
LDLRP01130 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LDLRP01130 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.5■□□□□ 0.39
LDLRP01130 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
LDLRP01130 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.5■□□□□ 0.39
LDLRP01130 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.5■□□□□ 0.39
LDLRP01130 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.5■□□□□ 0.39
LDLRP01130 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.5■□□□□ 0.39
LDLRP01130 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.5■□□□□ 0.39
LDLRP01130 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.5■□□□□ 0.39
LDLRP01130 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LDLRP01130 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LDLRP01130 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LDLRP01130 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.5■□□□□ 0.39
LDLRP01130 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
LDLRP01130 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
LDLRP01130 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDLRP01130 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.49■□□□□ 0.39
LDLRP01130 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LDLRP01130 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LDLRP01130 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LDLRP01130 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
LDLRP01130 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.49■□□□□ 0.39
LDLRP01130 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.49■□□□□ 0.39
LDLRP01130 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.49■□□□□ 0.39
LDLRP01130 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 COX11P1-201ENST00000489116 835 ntBASIC17.49■□□□□ 0.39
LDLRP01130 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.49■□□□□ 0.39
LDLRP01130 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LDLRP01130 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.49■□□□□ 0.39
LDLRP01130 AC093458.2-201ENST00000623150 629 ntBASIC17.49■□□□□ 0.39
LDLRP01130 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LDLRP01130 IER3-202ENST00000376377 1350 ntBASIC17.49■□□□□ 0.39
LDLRP01130 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LDLRP01130 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDLRP01130 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDLRP01130 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.48■□□□□ 0.39
LDLRP01130 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDLRP01130 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.48■□□□□ 0.39
LDLRP01130 AC093677.2-201ENST00000600169 1863 ntBASIC17.48■□□□□ 0.39
LDLRP01130 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.48■□□□□ 0.39
LDLRP01130 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LDLRP01130 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDLRP01130 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDLRP01130 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDLRP01130 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDLRP01130 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.48■□□□□ 0.39
LDLRP01130 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDLRP01130 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.48■□□□□ 0.39
LDLRP01130 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.48■□□□□ 0.39
LDLRP01130 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDLRP01130 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDLRP01130 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.48■□□□□ 0.39
LDLRP01130 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.48■□□□□ 0.39
LDLRP01130 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDLRP01130 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.48■□□□□ 0.39
LDLRP01130 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
LDLRP01130 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDLRP01130 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms