Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 AC004790.2-201ENST00000623588 572 ntBASIC20.54■□□□□ 0.88
ALDH1A1P00352 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ALDH1A1P00352 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A1P00352 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALDH1A1P00352 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALDH1A1P00352 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.53■□□□□ 0.88
ALDH1A1P00352 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.53■□□□□ 0.88
ALDH1A1P00352 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ALDH1A1P00352 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.53■□□□□ 0.88
ALDH1A1P00352 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.53■□□□□ 0.88
ALDH1A1P00352 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALDH1A1P00352 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.53■□□□□ 0.88
ALDH1A1P00352 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.53■□□□□ 0.88
ALDH1A1P00352 AC010654.1-201ENST00000615722 808 ntBASIC20.53■□□□□ 0.88
ALDH1A1P00352 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALDH1A1P00352 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALDH1A1P00352 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALDH1A1P00352 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALDH1A1P00352 AC099343.3-201ENST00000605834 2503 ntBASIC20.53■□□□□ 0.88
ALDH1A1P00352 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALDH1A1P00352 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
ALDH1A1P00352 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALDH1A1P00352 NCF1C-201ENST00000438382 1427 ntBASIC20.53■□□□□ 0.88
ALDH1A1P00352 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALDH1A1P00352 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ALDH1A1P00352 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ALDH1A1P00352 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ALDH1A1P00352 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 AC096734.2-201ENST00000562054 433 ntBASIC20.52■□□□□ 0.88
ALDH1A1P00352 MIR4745-201ENST00000577608 62 ntBASIC20.52■□□□□ 0.88
ALDH1A1P00352 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ALDH1A1P00352 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALDH1A1P00352 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 AC004877.2-201ENST00000623941 599 ntBASIC20.52■□□□□ 0.88
ALDH1A1P00352 AC073592.5-201ENST00000624854 528 ntBASIC20.52■□□□□ 0.88
ALDH1A1P00352 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.52■□□□□ 0.88
ALDH1A1P00352 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.52■□□□□ 0.87
ALDH1A1P00352 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ALDH1A1P00352 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.52■□□□□ 0.87
ALDH1A1P00352 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ALDH1A1P00352 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ALDH1A1P00352 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ALDH1A1P00352 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 FAM58CP-201ENST00000435741 640 ntBASIC20.51■□□□□ 0.87
ALDH1A1P00352 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ALDH1A1P00352 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
ALDH1A1P00352 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALDH1A1P00352 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALDH1A1P00352 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
ALDH1A1P00352 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALDH1A1P00352 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms