Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.77■□□□□ 0.92
MBD3O95983 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.77■□□□□ 0.92
MBD3O95983 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MBD3O95983 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MBD3O95983 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.77■□□□□ 0.91
MBD3O95983 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MBD3O95983 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
MBD3O95983 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MBD3O95983 RPS2P4-201ENST00000476944 856 ntBASIC20.76■□□□□ 0.91
MBD3O95983 AP002982.1-201ENST00000492365 877 ntBASIC20.76■□□□□ 0.91
MBD3O95983 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.76■□□□□ 0.91
MBD3O95983 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.76■□□□□ 0.91
MBD3O95983 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MBD3O95983 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3O95983 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.75■□□□□ 0.91
MBD3O95983 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 LINC01126-201ENST00000623515 1646 ntBASIC20.75■□□□□ 0.91
MBD3O95983 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD3O95983 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.75■□□□□ 0.91
MBD3O95983 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.75■□□□□ 0.91
MBD3O95983 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD3O95983 AC130371.2-201ENST00000619443 611 ntBASIC20.75■□□□□ 0.91
MBD3O95983 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD3O95983 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
MBD3O95983 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
MBD3O95983 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3O95983 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD3O95983 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
MBD3O95983 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.74■□□□□ 0.91
MBD3O95983 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.74■□□□□ 0.91
MBD3O95983 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MBD3O95983 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
MBD3O95983 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 DUTP2-201ENST00000519164 463 ntBASIC20.74■□□□□ 0.91
MBD3O95983 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
MBD3O95983 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
MBD3O95983 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
MBD3O95983 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3O95983 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 AC036111.1-201ENST00000533973 1582 ntBASIC20.73■□□□□ 0.91
MBD3O95983 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 KRT16P1-201ENST00000399124 1418 ntBASIC20.73■□□□□ 0.91
MBD3O95983 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MBD3O95983 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD3O95983 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.73■□□□□ 0.91
MBD3O95983 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.73■□□□□ 0.91
MBD3O95983 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
MBD3O95983 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.73■□□□□ 0.91
MBD3O95983 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.73■□□□□ 0.91
MBD3O95983 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.73■□□□□ 0.91
MBD3O95983 AC233263.1-201ENST00000578059 224 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms