Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GGPS1O95749 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.27■□□□□ 0.84
GGPS1O95749 AC079776.4-201ENST00000511039 504 ntBASIC20.27■□□□□ 0.84
GGPS1O95749 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.27■□□□□ 0.84
GGPS1O95749 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
GGPS1O95749 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
GGPS1O95749 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.27■□□□□ 0.84
GGPS1O95749 ESPNP-201ENST00000270691 2015 ntBASIC20.27■□□□□ 0.84
GGPS1O95749 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.27■□□□□ 0.84
GGPS1O95749 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GGPS1O95749 AC125634.1-201ENST00000438758 1403 ntBASIC20.27■□□□□ 0.83
GGPS1O95749 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
GGPS1O95749 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GGPS1O95749 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
GGPS1O95749 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
GGPS1O95749 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.27■□□□□ 0.83
GGPS1O95749 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.27■□□□□ 0.83
GGPS1O95749 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GGPS1O95749 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GGPS1O95749 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GGPS1O95749 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
GGPS1O95749 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
GGPS1O95749 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GGPS1O95749 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GGPS1O95749 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GGPS1O95749 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.26■□□□□ 0.83
GGPS1O95749 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GGPS1O95749 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.26■□□□□ 0.83
GGPS1O95749 AC009533.2-201ENST00000543664 586 ntBASIC20.26■□□□□ 0.83
GGPS1O95749 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GGPS1O95749 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.26■□□□□ 0.83
GGPS1O95749 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GGPS1O95749 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GGPS1O95749 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GGPS1O95749 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GGPS1O95749 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.26■□□□□ 0.83
GGPS1O95749 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GGPS1O95749 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GGPS1O95749 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.25■□□□□ 0.83
GGPS1O95749 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.25■□□□□ 0.83
GGPS1O95749 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.25■□□□□ 0.83
GGPS1O95749 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.25■□□□□ 0.83
GGPS1O95749 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.25■□□□□ 0.83
GGPS1O95749 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
GGPS1O95749 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GGPS1O95749 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.25■□□□□ 0.83
GGPS1O95749 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.25■□□□□ 0.83
GGPS1O95749 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GGPS1O95749 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
GGPS1O95749 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GGPS1O95749 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.24■□□□□ 0.83
GGPS1O95749 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.24■□□□□ 0.83
GGPS1O95749 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
GGPS1O95749 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
GGPS1O95749 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 AC112698.1-201ENST00000510299 916 ntBASIC20.24■□□□□ 0.83
GGPS1O95749 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.24■□□□□ 0.83
GGPS1O95749 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.24■□□□□ 0.83
GGPS1O95749 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.24■□□□□ 0.83
GGPS1O95749 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.24■□□□□ 0.83
GGPS1O95749 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
GGPS1O95749 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 HLA-A-201ENST00000376802 1334 ntBASIC20.24■□□□□ 0.83
GGPS1O95749 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.24■□□□□ 0.83
GGPS1O95749 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
GGPS1O95749 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
GGPS1O95749 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.24■□□□□ 0.83
GGPS1O95749 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GGPS1O95749 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.23■□□□□ 0.83
GGPS1O95749 AC132938.6-201ENST00000623828 1655 ntBASIC20.23■□□□□ 0.83
GGPS1O95749 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.23■□□□□ 0.83
GGPS1O95749 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms