Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC23.85■■□□□ 1.41
LTN1O94822 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.85■■□□□ 1.41
LTN1O94822 AC004817.3-201ENST00000602957 2129 ntBASIC23.85■■□□□ 1.41
LTN1O94822 AC002310.6-201ENST00000624451 1377 ntBASIC23.85■■□□□ 1.41
LTN1O94822 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LTN1O94822 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.84■■□□□ 1.41
LTN1O94822 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.84■■□□□ 1.41
LTN1O94822 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LTN1O94822 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LTN1O94822 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LTN1O94822 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LTN1O94822 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC23.84■■□□□ 1.41
LTN1O94822 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LTN1O94822 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.84■■□□□ 1.41
LTN1O94822 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
LTN1O94822 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC23.84■■□□□ 1.41
LTN1O94822 DNAJB3-202ENST00000449667 1266 ntBASIC23.84■■□□□ 1.41
LTN1O94822 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
LTN1O94822 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LTN1O94822 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LTN1O94822 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.84■■□□□ 1.41
LTN1O94822 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LTN1O94822 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.84■■□□□ 1.41
LTN1O94822 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LTN1O94822 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LTN1O94822 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.83■■□□□ 1.41
LTN1O94822 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
LTN1O94822 AC023274.1-201ENST00000418278 595 ntBASIC23.83■■□□□ 1.41
LTN1O94822 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23.83■■□□□ 1.41
LTN1O94822 AL022326.1-202ENST00000641533 845 ntBASIC23.83■■□□□ 1.41
LTN1O94822 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LTN1O94822 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LTN1O94822 MED29-202ENST00000594368 1471 ntTSL 2 BASIC23.83■■□□□ 1.41
LTN1O94822 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LTN1O94822 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LTN1O94822 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LTN1O94822 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.83■■□□□ 1.4
LTN1O94822 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LTN1O94822 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.83■■□□□ 1.4
LTN1O94822 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LTN1O94822 IMP4-203ENST00000409935 958 ntTSL 5 BASIC23.83■■□□□ 1.4
LTN1O94822 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LTN1O94822 AP001160.2-201ENST00000596071 487 ntBASIC23.83■■□□□ 1.4
LTN1O94822 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC23.83■■□□□ 1.4
LTN1O94822 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LTN1O94822 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
LTN1O94822 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.82■■□□□ 1.4
LTN1O94822 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.82■■□□□ 1.4
LTN1O94822 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.82■■□□□ 1.4
LTN1O94822 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
LTN1O94822 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC23.82■■□□□ 1.4
LTN1O94822 DNAJB3-201ENST00000446806 729 ntBASIC23.82■■□□□ 1.4
LTN1O94822 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC23.82■■□□□ 1.4
LTN1O94822 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23.82■■□□□ 1.4
LTN1O94822 AC064836.3-201ENST00000607928 673 ntBASIC23.82■■□□□ 1.4
LTN1O94822 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC23.82■■□□□ 1.4
LTN1O94822 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
LTN1O94822 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.82■■□□□ 1.4
LTN1O94822 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
LTN1O94822 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LTN1O94822 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LTN1O94822 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
LTN1O94822 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
LTN1O94822 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LTN1O94822 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LTN1O94822 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
LTN1O94822 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC23.81■■□□□ 1.4
LTN1O94822 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.81■■□□□ 1.4
LTN1O94822 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LTN1O94822 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.81■■□□□ 1.4
LTN1O94822 AC004967.1-201ENST00000453589 447 ntBASIC23.81■■□□□ 1.4
LTN1O94822 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.81■■□□□ 1.4
LTN1O94822 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LTN1O94822 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.81■■□□□ 1.4
LTN1O94822 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.81■■□□□ 1.4
LTN1O94822 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LTN1O94822 AC073592.3-201ENST00000625118 1834 ntBASIC23.81■■□□□ 1.4
LTN1O94822 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LTN1O94822 SIRPAP1-201ENST00000448467 1770 ntBASIC23.81■■□□□ 1.4
LTN1O94822 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC23.8■■□□□ 1.4
LTN1O94822 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC23.8■■□□□ 1.4
LTN1O94822 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
LTN1O94822 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LTN1O94822 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms