Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LRCH4O75427 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.84■□□□□ 0.61
LRCH4O75427 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.84■□□□□ 0.61
LRCH4O75427 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRCH4O75427 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRCH4O75427 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 AC104076.2-201ENST00000448912 469 ntBASIC18.84■□□□□ 0.61
LRCH4O75427 HOMER2P1-201ENST00000455653 964 ntBASIC18.84■□□□□ 0.61
LRCH4O75427 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRCH4O75427 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.84■□□□□ 0.61
LRCH4O75427 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.84■□□□□ 0.61
LRCH4O75427 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.84■□□□□ 0.61
LRCH4O75427 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.84■□□□□ 0.61
LRCH4O75427 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LRCH4O75427 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.84■□□□□ 0.61
LRCH4O75427 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
LRCH4O75427 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH4O75427 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRCH4O75427 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
LRCH4O75427 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.83■□□□□ 0.61
LRCH4O75427 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRCH4O75427 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH4O75427 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH4O75427 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.83■□□□□ 0.6
LRCH4O75427 RCN1P1-201ENST00000400413 996 ntBASIC18.83■□□□□ 0.6
LRCH4O75427 AL359075.1-203ENST00000462729 1002 ntBASIC18.83■□□□□ 0.6
LRCH4O75427 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.83■□□□□ 0.6
LRCH4O75427 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.83■□□□□ 0.6
LRCH4O75427 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH4O75427 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LRCH4O75427 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH4O75427 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH4O75427 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH4O75427 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.83■□□□□ 0.6
LRCH4O75427 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.83■□□□□ 0.6
LRCH4O75427 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH4O75427 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH4O75427 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH4O75427 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LRCH4O75427 LINC00896-202ENST00000609602 2128 ntBASIC18.82■□□□□ 0.6
LRCH4O75427 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH4O75427 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
LRCH4O75427 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.82■□□□□ 0.6
LRCH4O75427 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.82■□□□□ 0.6
LRCH4O75427 RN7SL850P-201ENST00000579959 291 ntBASIC18.82■□□□□ 0.6
LRCH4O75427 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.82■□□□□ 0.6
LRCH4O75427 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.82■□□□□ 0.6
LRCH4O75427 HYMAI.1-201ENST00000620949 238 ntBASIC18.82■□□□□ 0.6
LRCH4O75427 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH4O75427 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH4O75427 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.82■□□□□ 0.6
LRCH4O75427 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.82■□□□□ 0.6
LRCH4O75427 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH4O75427 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH4O75427 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
LRCH4O75427 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.81■□□□□ 0.6
LRCH4O75427 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
LRCH4O75427 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.81■□□□□ 0.6
LRCH4O75427 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms