Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF253O75346 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF253O75346 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 AP000593.1-201ENST00000393668 712 ntBASIC14.13□□□□□ -0.15
ZNF253O75346 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF253O75346 AC091390.4-202ENST00000476426 537 ntBASIC14.13□□□□□ -0.15
ZNF253O75346 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZNF253O75346 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF253O75346 AC124016.1-201ENST00000609552 612 ntBASIC14.13□□□□□ -0.15
ZNF253O75346 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF253O75346 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ZNF253O75346 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ZNF253O75346 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF253O75346 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
ZNF253O75346 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF253O75346 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF253O75346 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF253O75346 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF253O75346 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF253O75346 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF253O75346 RCC2P3-201ENST00000418112 1537 ntBASIC14.12□□□□□ -0.15
ZNF253O75346 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF253O75346 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF253O75346 AL109659.2-201ENST00000606809 1674 ntBASIC14.12□□□□□ -0.15
ZNF253O75346 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF253O75346 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF253O75346 AP002982.1-201ENST00000492365 877 ntBASIC14.12□□□□□ -0.15
ZNF253O75346 CKBP1-201ENST00000565489 1086 ntBASIC14.12□□□□□ -0.15
ZNF253O75346 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF253O75346 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF253O75346 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZNF253O75346 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF253O75346 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF253O75346 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF253O75346 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF253O75346 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF253O75346 MYLKP1-201ENST00000509077 1580 ntBASIC14.12□□□□□ -0.15
ZNF253O75346 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF253O75346 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF253O75346 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF253O75346 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF253O75346 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF253O75346 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF253O75346 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZNF253O75346 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF253O75346 AC093677.2-201ENST00000600169 1863 ntBASIC14.12□□□□□ -0.15
ZNF253O75346 AC008556.1-201ENST00000610908 2040 ntBASIC14.12□□□□□ -0.15
ZNF253O75346 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF253O75346 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF253O75346 AC135776.1-201ENST00000319817 2481 ntBASIC14.11□□□□□ -0.15
ZNF253O75346 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 AL355802.2-201ENST00000402069 882 ntBASIC14.11□□□□□ -0.15
ZNF253O75346 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF253O75346 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.11□□□□□ -0.15
ZNF253O75346 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 RNA5SP413-201ENST00000516373 109 ntBASIC14.11□□□□□ -0.15
ZNF253O75346 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.11□□□□□ -0.15
ZNF253O75346 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF253O75346 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF253O75346 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms