Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.91■□□□□ 0.62
OPHN1O60890 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
OPHN1O60890 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.9■□□□□ 0.62
OPHN1O60890 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.9■□□□□ 0.62
OPHN1O60890 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
OPHN1O60890 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.9■□□□□ 0.62
OPHN1O60890 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
OPHN1O60890 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.9■□□□□ 0.62
OPHN1O60890 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.9■□□□□ 0.62
OPHN1O60890 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
OPHN1O60890 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OPHN1O60890 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
OPHN1O60890 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
OPHN1O60890 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
OPHN1O60890 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
OPHN1O60890 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.89■□□□□ 0.62
OPHN1O60890 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
OPHN1O60890 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
OPHN1O60890 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.89■□□□□ 0.61
OPHN1O60890 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.89■□□□□ 0.61
OPHN1O60890 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.89■□□□□ 0.61
OPHN1O60890 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.89■□□□□ 0.61
OPHN1O60890 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
OPHN1O60890 NOC2LP1-202ENST00000452600 2235 ntBASIC18.89■□□□□ 0.61
OPHN1O60890 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
OPHN1O60890 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 OR6D1P-202ENST00000641007 5290 ntBASIC18.88■□□□□ 0.61
OPHN1O60890 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.88■□□□□ 0.61
OPHN1O60890 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
OPHN1O60890 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.88■□□□□ 0.61
OPHN1O60890 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.88■□□□□ 0.61
OPHN1O60890 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.88■□□□□ 0.61
OPHN1O60890 AC012313.10-201ENST00000623509 926 ntBASIC18.88■□□□□ 0.61
OPHN1O60890 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.88■□□□□ 0.61
OPHN1O60890 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.88■□□□□ 0.61
OPHN1O60890 HOXB1-202ENST00000577092 1414 ntBASIC18.88■□□□□ 0.61
OPHN1O60890 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
OPHN1O60890 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
OPHN1O60890 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
OPHN1O60890 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 AC135776.1-201ENST00000319817 2481 ntBASIC18.88■□□□□ 0.61
OPHN1O60890 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OPHN1O60890 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OPHN1O60890 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
OPHN1O60890 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OPHN1O60890 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OPHN1O60890 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
OPHN1O60890 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
OPHN1O60890 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
OPHN1O60890 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
OPHN1O60890 ATP5G2P1-201ENST00000433580 426 ntBASIC18.87■□□□□ 0.61
OPHN1O60890 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.87■□□□□ 0.61
OPHN1O60890 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
OPHN1O60890 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.87■□□□□ 0.61
OPHN1O60890 KRT8P7-201ENST00000533003 1432 ntBASIC18.87■□□□□ 0.61
OPHN1O60890 LINC01311-201ENST00000565162 1445 ntBASIC18.87■□□□□ 0.61
OPHN1O60890 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
OPHN1O60890 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.87■□□□□ 0.61
OPHN1O60890 AC083849.1-201ENST00000615227 514 ntBASIC18.87■□□□□ 0.61
OPHN1O60890 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms