Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZIC3O60481 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
ZIC3O60481 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.26■□□□□ 0.19
ZIC3O60481 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZIC3O60481 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZIC3O60481 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.25■□□□□ 0.19
ZIC3O60481 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 AC138932.1-201ENST00000534164 6830 ntBASIC16.25■□□□□ 0.19
ZIC3O60481 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.25■□□□□ 0.19
ZIC3O60481 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.25■□□□□ 0.19
ZIC3O60481 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ZIC3O60481 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.25■□□□□ 0.19
ZIC3O60481 AC104819.1-201ENST00000504587 486 ntBASIC16.25■□□□□ 0.19
ZIC3O60481 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.25■□□□□ 0.19
ZIC3O60481 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.25■□□□□ 0.19
ZIC3O60481 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.25■□□□□ 0.19
ZIC3O60481 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.25■□□□□ 0.19
ZIC3O60481 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.25■□□□□ 0.19
ZIC3O60481 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.25■□□□□ 0.19
ZIC3O60481 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.25■□□□□ 0.19
ZIC3O60481 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.25■□□□□ 0.19
ZIC3O60481 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.25■□□□□ 0.19
ZIC3O60481 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ZIC3O60481 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
ZIC3O60481 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZIC3O60481 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ZIC3O60481 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ZIC3O60481 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ZIC3O60481 ABALON-201ENST00000629058 1903 ntBASIC16.24■□□□□ 0.19
ZIC3O60481 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ZIC3O60481 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ZIC3O60481 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.24■□□□□ 0.19
ZIC3O60481 DUSP5P1-201ENST00000441325 1139 ntBASIC16.24■□□□□ 0.19
ZIC3O60481 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.24■□□□□ 0.19
ZIC3O60481 AC005336.2-201ENST00000593183 939 ntBASIC16.24■□□□□ 0.19
ZIC3O60481 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.24■□□□□ 0.19
ZIC3O60481 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 AC012313.10-201ENST00000623509 926 ntBASIC16.24■□□□□ 0.19
ZIC3O60481 AC135050.7-201ENST00000624508 2218 ntBASIC16.24■□□□□ 0.19
ZIC3O60481 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
ZIC3O60481 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ZIC3O60481 NSUN5P1-202ENST00000421140 1535 ntBASIC16.24■□□□□ 0.19
ZIC3O60481 NSUN5P2-203ENST00000457352 1529 ntBASIC16.24■□□□□ 0.19
ZIC3O60481 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZIC3O60481 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ZIC3O60481 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
ZIC3O60481 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZIC3O60481 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ZIC3O60481 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 AC022898.2-201ENST00000616822 1312 ntBASIC16.23■□□□□ 0.19
ZIC3O60481 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.23■□□□□ 0.19
ZIC3O60481 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ZIC3O60481 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms