Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF13O43567 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
RNF13O43567 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
RNF13O43567 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF13O43567 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF13O43567 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF13O43567 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF13O43567 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RNF13O43567 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF13O43567 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.5■□□□□ 0.23
RNF13O43567 ECEL1P2-202ENST00000465689 757 ntBASIC16.5■□□□□ 0.23
RNF13O43567 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF13O43567 AC009065.1-201ENST00000564055 1225 ntBASIC16.5■□□□□ 0.23
RNF13O43567 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF13O43567 AL512604.3-201ENST00000569583 964 ntBASIC16.5■□□□□ 0.23
RNF13O43567 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.5■□□□□ 0.23
RNF13O43567 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF13O43567 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF13O43567 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNF13O43567 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
RNF13O43567 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF13O43567 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF13O43567 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF13O43567 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF13O43567 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF13O43567 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF13O43567 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RNF13O43567 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF13O43567 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF13O43567 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF13O43567 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF13O43567 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF13O43567 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF13O43567 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
RNF13O43567 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF13O43567 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RNF13O43567 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF13O43567 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RNF13O43567 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF13O43567 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF13O43567 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF13O43567 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF13O43567 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF13O43567 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF13O43567 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF13O43567 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF13O43567 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF13O43567 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF13O43567 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF13O43567 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF13O43567 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF13O43567 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF13O43567 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF13O43567 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RNF13O43567 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF13O43567 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF13O43567 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.48■□□□□ 0.23
RNF13O43567 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF13O43567 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF13O43567 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF13O43567 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF13O43567 SIRPAP1-201ENST00000448467 1770 ntBASIC16.48■□□□□ 0.23
RNF13O43567 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF13O43567 LINC01568-207ENST00000641790 1380 ntBASIC16.48■□□□□ 0.23
RNF13O43567 SDHAP2-201ENST00000455183 2001 ntBASIC16.48■□□□□ 0.23
RNF13O43567 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
RNF13O43567 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF13O43567 REXO1L9P-201ENST00000604264 2108 ntBASIC16.48■□□□□ 0.23
RNF13O43567 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF13O43567 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
RNF13O43567 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF13O43567 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms