Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RN7SL606P-201ENST00000472779 293 ntBASIC20.82■□□□□ 0.92
PRPF3O43395 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.82■□□□□ 0.92
PRPF3O43395 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.82■□□□□ 0.92
PRPF3O43395 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.82■□□□□ 0.92
PRPF3O43395 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.82■□□□□ 0.92
PRPF3O43395 AL358472.4-201ENST00000633140 710 ntBASIC20.82■□□□□ 0.92
PRPF3O43395 AP000550.4-202ENST00000639755 178 ntBASIC20.82■□□□□ 0.92
PRPF3O43395 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PRPF3O43395 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.82■□□□□ 0.92
PRPF3O43395 IER3-202ENST00000376377 1350 ntBASIC20.82■□□□□ 0.92
PRPF3O43395 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.82■□□□□ 0.92
PRPF3O43395 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PRPF3O43395 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.81■□□□□ 0.92
PRPF3O43395 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PRPF3O43395 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.81■□□□□ 0.92
PRPF3O43395 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.81■□□□□ 0.92
PRPF3O43395 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PRPF3O43395 NOC2LP2-201ENST00000407594 1944 ntBASIC20.81■□□□□ 0.92
PRPF3O43395 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.81■□□□□ 0.92
PRPF3O43395 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
PRPF3O43395 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.81■□□□□ 0.92
PRPF3O43395 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PRPF3O43395 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.81■□□□□ 0.92
PRPF3O43395 AC016734.2-201ENST00000624325 1377 ntBASIC20.81■□□□□ 0.92
PRPF3O43395 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.81■□□□□ 0.92
PRPF3O43395 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PRPF3O43395 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRPF3O43395 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.8■□□□□ 0.92
PRPF3O43395 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PRPF3O43395 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PRPF3O43395 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.8■□□□□ 0.92
PRPF3O43395 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.8■□□□□ 0.92
PRPF3O43395 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.8■□□□□ 0.92
PRPF3O43395 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.8■□□□□ 0.92
PRPF3O43395 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.8■□□□□ 0.92
PRPF3O43395 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRPF3O43395 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
PRPF3O43395 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PRPF3O43395 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.79■□□□□ 0.92
PRPF3O43395 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRPF3O43395 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
PRPF3O43395 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRPF3O43395 AC100803.2-201ENST00000562459 1963 ntBASIC20.79■□□□□ 0.92
PRPF3O43395 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRPF3O43395 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRPF3O43395 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PRPF3O43395 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRPF3O43395 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRPF3O43395 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRPF3O43395 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.79■□□□□ 0.92
PRPF3O43395 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.79■□□□□ 0.92
PRPF3O43395 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
PRPF3O43395 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.79■□□□□ 0.92
PRPF3O43395 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRPF3O43395 MTCL1P1-201ENST00000446207 792 ntBASIC20.79■□□□□ 0.92
PRPF3O43395 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRPF3O43395 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRPF3O43395 AC112698.1-201ENST00000510299 916 ntBASIC20.79■□□□□ 0.92
PRPF3O43395 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.79■□□□□ 0.92
PRPF3O43395 GUSBP12-201ENST00000513727 720 ntBASIC20.79■□□□□ 0.92
PRPF3O43395 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.79■□□□□ 0.92
PRPF3O43395 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.79■□□□□ 0.92
PRPF3O43395 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PRPF3O43395 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PRPF3O43395 AL121672.3-201ENST00000608644 468 ntBASIC20.79■□□□□ 0.92
PRPF3O43395 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms