Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MSI1O43347 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.77■□□□□ 0.6
MSI1O43347 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.77■□□□□ 0.6
MSI1O43347 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.77■□□□□ 0.6
MSI1O43347 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
MSI1O43347 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 AP005901.3-202ENST00000581653 237 ntBASIC18.77■□□□□ 0.6
MSI1O43347 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.77■□□□□ 0.6
MSI1O43347 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.77■□□□□ 0.6
MSI1O43347 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.77■□□□□ 0.6
MSI1O43347 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MSI1O43347 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.77■□□□□ 0.6
MSI1O43347 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 AC233702.3-201ENST00000578656 1387 ntBASIC18.77■□□□□ 0.6
MSI1O43347 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.77■□□□□ 0.6
MSI1O43347 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
MSI1O43347 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MSI1O43347 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.77■□□□□ 0.59
MSI1O43347 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.77■□□□□ 0.59
MSI1O43347 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MSI1O43347 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MSI1O43347 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
MSI1O43347 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.76■□□□□ 0.59
MSI1O43347 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
MSI1O43347 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.76■□□□□ 0.59
MSI1O43347 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.76■□□□□ 0.59
MSI1O43347 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.76■□□□□ 0.59
MSI1O43347 AC068472.1-201ENST00000474589 881 ntBASIC18.76■□□□□ 0.59
MSI1O43347 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MSI1O43347 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.76■□□□□ 0.59
MSI1O43347 AC009154.2-201ENST00000621177 724 ntBASIC18.76■□□□□ 0.59
MSI1O43347 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.76■□□□□ 0.59
MSI1O43347 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.76■□□□□ 0.59
MSI1O43347 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
MSI1O43347 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSI1O43347 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.75■□□□□ 0.59
MSI1O43347 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.75■□□□□ 0.59
MSI1O43347 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.75■□□□□ 0.59
MSI1O43347 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.75■□□□□ 0.59
MSI1O43347 KRT18P65-201ENST00000439811 1286 ntBASIC18.75■□□□□ 0.59
MSI1O43347 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.75■□□□□ 0.59
MSI1O43347 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
MSI1O43347 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MSI1O43347 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.75■□□□□ 0.59
MSI1O43347 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.75■□□□□ 0.59
MSI1O43347 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MSI1O43347 NEFHP1-201ENST00000412845 2629 ntBASIC18.75■□□□□ 0.59
MSI1O43347 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
MSI1O43347 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
MSI1O43347 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
MSI1O43347 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSI1O43347 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.75■□□□□ 0.59
MSI1O43347 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.74■□□□□ 0.59
MSI1O43347 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.74■□□□□ 0.59
MSI1O43347 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
MSI1O43347 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms