Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.34■□□□□ 0.37
NDUFS4O43181 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.34■□□□□ 0.37
NDUFS4O43181 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NDUFS4O43181 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.34■□□□□ 0.37
NDUFS4O43181 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.34■□□□□ 0.37
NDUFS4O43181 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.34■□□□□ 0.37
NDUFS4O43181 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.34■□□□□ 0.37
NDUFS4O43181 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
NDUFS4O43181 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.34■□□□□ 0.37
NDUFS4O43181 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.34■□□□□ 0.37
NDUFS4O43181 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.34■□□□□ 0.37
NDUFS4O43181 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.34■□□□□ 0.37
NDUFS4O43181 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.34■□□□□ 0.37
NDUFS4O43181 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
NDUFS4O43181 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
NDUFS4O43181 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.34■□□□□ 0.37
NDUFS4O43181 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.34■□□□□ 0.37
NDUFS4O43181 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NDUFS4O43181 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFS4O43181 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFS4O43181 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NDUFS4O43181 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFS4O43181 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFS4O43181 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NDUFS4O43181 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFS4O43181 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFS4O43181 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NDUFS4O43181 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.33■□□□□ 0.37
NDUFS4O43181 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFS4O43181 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.33■□□□□ 0.36
NDUFS4O43181 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFS4O43181 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.33■□□□□ 0.36
NDUFS4O43181 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFS4O43181 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFS4O43181 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFS4O43181 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.33■□□□□ 0.36
NDUFS4O43181 AL136038.3-201ENST00000561909 1096 ntBASIC17.33■□□□□ 0.36
NDUFS4O43181 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.33■□□□□ 0.36
NDUFS4O43181 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.33■□□□□ 0.36
NDUFS4O43181 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFS4O43181 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NDUFS4O43181 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFS4O43181 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
NDUFS4O43181 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFS4O43181 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFS4O43181 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NDUFS4O43181 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.33■□□□□ 0.36
NDUFS4O43181 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFS4O43181 AC138028.4-201ENST00000564984 1845 ntBASIC17.33■□□□□ 0.36
NDUFS4O43181 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.33■□□□□ 0.36
NDUFS4O43181 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.32■□□□□ 0.36
NDUFS4O43181 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.32■□□□□ 0.36
NDUFS4O43181 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.32■□□□□ 0.36
NDUFS4O43181 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 LINC00602-201ENST00000629776 2065 ntBASIC17.32■□□□□ 0.36
NDUFS4O43181 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NDUFS4O43181 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.32■□□□□ 0.36
NDUFS4O43181 AC005332.1-201ENST00000577698 1310 ntBASIC17.32■□□□□ 0.36
NDUFS4O43181 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.32■□□□□ 0.36
NDUFS4O43181 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.32■□□□□ 0.36
NDUFS4O43181 AC113404.2-201ENST00000507884 177 ntBASIC17.32■□□□□ 0.36
NDUFS4O43181 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.32■□□□□ 0.36
NDUFS4O43181 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.32■□□□□ 0.36
NDUFS4O43181 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NDUFS4O43181 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.32■□□□□ 0.36
NDUFS4O43181 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.32■□□□□ 0.36
NDUFS4O43181 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFS4O43181 FLJ13224-201ENST00000313737 1514 ntBASIC17.31■□□□□ 0.36
NDUFS4O43181 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NDUFS4O43181 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms