Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RNF113AO15541 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
RNF113AO15541 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF113AO15541 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF113AO15541 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF113AO15541 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF113AO15541 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF113AO15541 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF113AO15541 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF113AO15541 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
RNF113AO15541 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF113AO15541 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF113AO15541 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF113AO15541 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF113AO15541 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF113AO15541 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF113AO15541 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF113AO15541 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF113AO15541 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RNF113AO15541 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF113AO15541 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RNF113AO15541 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF113AO15541 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF113AO15541 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF113AO15541 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF113AO15541 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF113AO15541 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF113AO15541 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF113AO15541 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF113AO15541 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF113AO15541 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF113AO15541 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF113AO15541 AC091607.1-201ENST00000490318 1060 ntBASIC21.67■■□□□ 1.06
RNF113AO15541 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.67■■□□□ 1.06
RNF113AO15541 AC092329.2-201ENST00000598402 547 ntBASIC21.67■■□□□ 1.06
RNF113AO15541 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF113AO15541 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF113AO15541 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF113AO15541 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF113AO15541 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF113AO15541 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF113AO15541 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF113AO15541 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF113AO15541 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 AC022898.2-201ENST00000616822 1312 ntBASIC21.66■■□□□ 1.06
RNF113AO15541 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF113AO15541 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.66■■□□□ 1.06
RNF113AO15541 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 AC011840.4-201ENST00000578471 627 ntBASIC21.66■■□□□ 1.06
RNF113AO15541 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF113AO15541 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF113AO15541 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RNF113AO15541 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF113AO15541 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF113AO15541 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF113AO15541 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF113AO15541 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF113AO15541 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF113AO15541 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF113AO15541 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF113AO15541 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF113AO15541 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF113AO15541 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF113AO15541 AC233702.3-201ENST00000578656 1387 ntBASIC21.65■■□□□ 1.06
RNF113AO15541 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF113AO15541 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RNF113AO15541 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF113AO15541 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF113AO15541 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF113AO15541 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms