Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.63■□□□□ 0.41
HDAC3O15379 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC3O15379 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HDAC3O15379 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC3O15379 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HDAC3O15379 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.63■□□□□ 0.41
HDAC3O15379 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC3O15379 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 AC133963.1-201ENST00000504166 1679 ntBASIC17.62■□□□□ 0.41
HDAC3O15379 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.62■□□□□ 0.41
HDAC3O15379 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 FAM197Y1-201ENST00000421178 764 ntBASIC17.62■□□□□ 0.41
HDAC3O15379 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 KRT18P23-201ENST00000435622 1283 ntBASIC17.62■□□□□ 0.41
HDAC3O15379 DUTP2-201ENST00000519164 463 ntBASIC17.62■□□□□ 0.41
HDAC3O15379 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.62■□□□□ 0.41
HDAC3O15379 AC009065.1-201ENST00000564055 1225 ntBASIC17.62■□□□□ 0.41
HDAC3O15379 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
HDAC3O15379 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC3O15379 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC3O15379 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HDAC3O15379 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HDAC3O15379 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 AL024508.2-201ENST00000607749 1894 ntBASIC17.61■□□□□ 0.41
HDAC3O15379 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC3O15379 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC3O15379 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HDAC3O15379 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.61■□□□□ 0.41
HDAC3O15379 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC3O15379 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HDAC3O15379 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.61■□□□□ 0.41
HDAC3O15379 AC128676.1-201ENST00000454392 318 ntBASIC17.61■□□□□ 0.41
HDAC3O15379 RPPH1-201ENST00000516869 333 ntBASIC17.61■□□□□ 0.41
HDAC3O15379 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.61■□□□□ 0.41
HDAC3O15379 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC3O15379 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.61■□□□□ 0.41
HDAC3O15379 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.61■□□□□ 0.41
HDAC3O15379 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HDAC3O15379 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC3O15379 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HDAC3O15379 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 AC124067.4-201ENST00000519691 2379 ntBASIC17.6■□□□□ 0.41
HDAC3O15379 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC3O15379 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC3O15379 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC3O15379 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC3O15379 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC3O15379 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC3O15379 AC116562.2-201ENST00000507042 360 ntBASIC17.6■□□□□ 0.41
HDAC3O15379 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC3O15379 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.6■□□□□ 0.41
HDAC3O15379 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC3O15379 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC3O15379 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HDAC3O15379 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
HDAC3O15379 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC3O15379 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HDAC3O15379 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC3O15379 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms