Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.58■■□□□ 1.04
FOXN1O15353 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FOXN1O15353 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.58■■□□□ 1.04
FOXN1O15353 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.57■■□□□ 1.04
FOXN1O15353 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.57■■□□□ 1.04
FOXN1O15353 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXN1O15353 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXN1O15353 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXN1O15353 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXN1O15353 AC104581.1-202ENST00000635932 2618 ntBASIC21.57■■□□□ 1.04
FOXN1O15353 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXN1O15353 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXN1O15353 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXN1O15353 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXN1O15353 AC007274.1-201ENST00000439805 662 ntBASIC21.57■■□□□ 1.04
FOXN1O15353 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.57■■□□□ 1.04
FOXN1O15353 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.57■■□□□ 1.04
FOXN1O15353 AC138761.1-201ENST00000584393 385 ntBASIC21.57■■□□□ 1.04
FOXN1O15353 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXN1O15353 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXN1O15353 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
FOXN1O15353 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
FOXN1O15353 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
FOXN1O15353 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
FOXN1O15353 AL138781.2-201ENST00000617896 1843 ntBASIC21.57■■□□□ 1.04
FOXN1O15353 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXN1O15353 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
FOXN1O15353 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
FOXN1O15353 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
FOXN1O15353 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.56■■□□□ 1.04
FOXN1O15353 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
FOXN1O15353 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
FOXN1O15353 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.56■■□□□ 1.04
FOXN1O15353 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
FOXN1O15353 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
FOXN1O15353 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 GK-202ENST00000378941 458 ntTSL 3 BASIC21.56■■□□□ 1.04
FOXN1O15353 AC254562.1-201ENST00000417586 456 ntBASIC21.56■■□□□ 1.04
FOXN1O15353 RBM17P3-201ENST00000417687 1192 ntBASIC21.56■■□□□ 1.04
FOXN1O15353 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
FOXN1O15353 AC009533.2-201ENST00000543664 586 ntBASIC21.56■■□□□ 1.04
FOXN1O15353 AC021087.4-201ENST00000563761 564 ntBASIC21.56■■□□□ 1.04
FOXN1O15353 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.56■■□□□ 1.04
FOXN1O15353 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.56■■□□□ 1.04
FOXN1O15353 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
FOXN1O15353 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
FOXN1O15353 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXN1O15353 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.55■■□□□ 1.04
FOXN1O15353 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.55■■□□□ 1.04
FOXN1O15353 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.55■■□□□ 1.04
FOXN1O15353 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.55■■□□□ 1.04
FOXN1O15353 AC005829.1-201ENST00000570002 483 ntBASIC21.55■■□□□ 1.04
FOXN1O15353 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.55■■□□□ 1.04
FOXN1O15353 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.55■■□□□ 1.04
FOXN1O15353 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXN1O15353 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
FOXN1O15353 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.54■■□□□ 1.04
FOXN1O15353 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
FOXN1O15353 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
FOXN1O15353 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.54■■□□□ 1.04
FOXN1O15353 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.54■■□□□ 1.04
FOXN1O15353 MCCD1P1-208ENST00000445732 328 ntBASIC21.54■■□□□ 1.04
FOXN1O15353 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.54■■□□□ 1.04
FOXN1O15353 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
FOXN1O15353 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
FOXN1O15353 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXN1O15353 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.54■■□□□ 1.04
FOXN1O15353 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms