Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.46■□□□□ 0.71
CEP290O15078 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.46■□□□□ 0.71
CEP290O15078 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.46■□□□□ 0.71
CEP290O15078 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.46■□□□□ 0.71
CEP290O15078 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.46■□□□□ 0.71
CEP290O15078 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.46■□□□□ 0.71
CEP290O15078 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.46■□□□□ 0.71
CEP290O15078 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CEP290O15078 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 AC099778.1-201ENST00000568593 1911 ntBASIC19.46■□□□□ 0.71
CEP290O15078 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CEP290O15078 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.46■□□□□ 0.71
CEP290O15078 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.46■□□□□ 0.71
CEP290O15078 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
CEP290O15078 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.46■□□□□ 0.71
CEP290O15078 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.46■□□□□ 0.71
CEP290O15078 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
CEP290O15078 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CEP290O15078 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.46■□□□□ 0.7
CEP290O15078 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.45■□□□□ 0.7
CEP290O15078 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.45■□□□□ 0.7
CEP290O15078 MIR1909-201ENST00000411312 80 ntBASIC19.45■□□□□ 0.7
CEP290O15078 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.45■□□□□ 0.7
CEP290O15078 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 TIMM8BP1-201ENST00000452384 211 ntBASIC19.45■□□□□ 0.7
CEP290O15078 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.45■□□□□ 0.7
CEP290O15078 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.45■□□□□ 0.7
CEP290O15078 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.45■□□□□ 0.7
CEP290O15078 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.45■□□□□ 0.7
CEP290O15078 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CEP290O15078 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.45■□□□□ 0.7
CEP290O15078 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.45■□□□□ 0.7
CEP290O15078 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.45■□□□□ 0.7
CEP290O15078 IGHV3-65-201ENST00000523210 341 ntBASIC19.45■□□□□ 0.7
CEP290O15078 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CEP290O15078 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.45■□□□□ 0.7
CEP290O15078 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.45■□□□□ 0.7
CEP290O15078 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.45■□□□□ 0.7
CEP290O15078 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 AC148477.5-201ENST00000625164 1645 ntBASIC19.45■□□□□ 0.7
CEP290O15078 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.45■□□□□ 0.7
CEP290O15078 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CEP290O15078 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CEP290O15078 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CEP290O15078 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CEP290O15078 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CEP290O15078 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CEP290O15078 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.44■□□□□ 0.7
CEP290O15078 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CEP290O15078 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.44■□□□□ 0.7
CEP290O15078 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CEP290O15078 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CEP290O15078 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.44■□□□□ 0.7
CEP290O15078 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.44■□□□□ 0.7
CEP290O15078 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CEP290O15078 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CEP290O15078 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CEP290O15078 AC003669.1-201ENST00000334569 611 ntBASIC19.44■□□□□ 0.7
CEP290O15078 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CEP290O15078 KLF4P1-201ENST00000412782 1185 ntBASIC19.44■□□□□ 0.7
CEP290O15078 COX5BP8-201ENST00000416911 349 ntBASIC19.44■□□□□ 0.7
CEP290O15078 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.44■□□□□ 0.7
CEP290O15078 AC096734.2-201ENST00000562054 433 ntBASIC19.44■□□□□ 0.7
CEP290O15078 AC140878.1-201ENST00000565277 250 ntBASIC19.44■□□□□ 0.7
CEP290O15078 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.44■□□□□ 0.7
CEP290O15078 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.44■□□□□ 0.7
CEP290O15078 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CEP290O15078 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CEP290O15078 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CEP290O15078 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.43■□□□□ 0.7
CEP290O15078 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CEP290O15078 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.43■□□□□ 0.7
CEP290O15078 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CEP290O15078 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.43■□□□□ 0.7
CEP290O15078 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.43■□□□□ 0.7
CEP290O15078 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CEP290O15078 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms