Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDC7O00311 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.78■□□□□ 0.44
CDC7O00311 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.78■□□□□ 0.44
CDC7O00311 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC7O00311 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC7O00311 AC090340.1-201ENST00000620778 4980 ntBASIC17.78■□□□□ 0.44
CDC7O00311 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC7O00311 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC7O00311 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC7O00311 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDC7O00311 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CDC7O00311 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.77■□□□□ 0.44
CDC7O00311 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 ATP5G1P1-201ENST00000448724 379 ntBASIC17.77■□□□□ 0.44
CDC7O00311 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.77■□□□□ 0.44
CDC7O00311 AL441883.1-201ENST00000566170 1045 ntBASIC17.77■□□□□ 0.44
CDC7O00311 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CDC7O00311 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC7O00311 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.77■□□□□ 0.44
CDC7O00311 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CDC7O00311 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CDC7O00311 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDC7O00311 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC7O00311 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDC7O00311 KRT18P55-202ENST00000578578 1546 ntBASIC17.77■□□□□ 0.43
CDC7O00311 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC7O00311 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.77■□□□□ 0.43
CDC7O00311 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC7O00311 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC7O00311 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDC7O00311 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC7O00311 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.76■□□□□ 0.43
CDC7O00311 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.76■□□□□ 0.43
CDC7O00311 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.76■□□□□ 0.43
CDC7O00311 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDC7O00311 AC140113.3-201ENST00000605663 199 ntBASIC17.76■□□□□ 0.43
CDC7O00311 AC097493.4-201ENST00000641197 219 ntBASIC17.76■□□□□ 0.43
CDC7O00311 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.76■□□□□ 0.43
CDC7O00311 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDC7O00311 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.76■□□□□ 0.43
CDC7O00311 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CDC7O00311 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC7O00311 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDC7O00311 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDC7O00311 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDC7O00311 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 AC006116.8-202ENST00000587620 1550 ntBASIC17.75■□□□□ 0.43
CDC7O00311 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.75■□□□□ 0.43
CDC7O00311 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDC7O00311 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDC7O00311 BCL2-203ENST00000589955 5011 ntBASIC17.75■□□□□ 0.43
CDC7O00311 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDC7O00311 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CDC7O00311 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.75■□□□□ 0.43
CDC7O00311 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.75■□□□□ 0.43
CDC7O00311 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.75■□□□□ 0.43
CDC7O00311 AC079602.3-201ENST00000623931 403 ntBASIC17.75■□□□□ 0.43
CDC7O00311 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDC7O00311 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC7O00311 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.75■□□□□ 0.43
CDC7O00311 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms