Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 VENTXP7-201ENST00000475503 772 ntBASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 GUSBP12-201ENST00000513727 720 ntBASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 Z69720.1-201ENST00000601483 472 ntBASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 FEM1AP3-201ENST00000403722 1741 ntBASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 AL161938.1-201ENST00000569833 2180 ntBASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMX2-CTNND1H3BSU7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMX2-CTNND1H3BSU7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 KRT18P31-201ENST00000506277 1292 ntBASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 GPR32P1-201ENST00000601788 811 ntBASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 AL390719.2-201ENST00000606993 987 ntBASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMX2-CTNND1H3BSU7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms