Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AP005901.3-202ENST00000581653 237 ntBASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 AL353801.3-201ENST00000609898 542 ntBASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.85■□□□□ 0.61
YJEFN3A6XGL0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 AC233702.3-201ENST00000578656 1387 ntBASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
YJEFN3A6XGL0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
YJEFN3A6XGL0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
YJEFN3A6XGL0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
YJEFN3A6XGL0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.83■□□□□ 0.61
YJEFN3A6XGL0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.83■□□□□ 0.61
YJEFN3A6XGL0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
YJEFN3A6XGL0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
YJEFN3A6XGL0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
YJEFN3A6XGL0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 AC112698.1-201ENST00000510299 916 ntBASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 AC011840.4-201ENST00000578471 627 ntBASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YJEFN3A6XGL0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 KRT18P56-201ENST00000507275 550 ntBASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 AP000867.3-201ENST00000524675 377 ntBASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
YJEFN3A6XGL0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms