Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL6A6A6NMZ7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL6A6A6NMZ7 AC004461.1-201ENST00000412461 403 ntBASIC16.24■□□□□ 0.19
COL6A6A6NMZ7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.24■□□□□ 0.19
COL6A6A6NMZ7 PRYP5-201ENST00000451909 266 ntBASIC16.24■□□□□ 0.19
COL6A6A6NMZ7 AC067863.1-201ENST00000494933 530 ntBASIC16.24■□□□□ 0.19
COL6A6A6NMZ7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.24■□□□□ 0.19
COL6A6A6NMZ7 MTMR9LP-203ENST00000426597 1545 ntBASIC16.24■□□□□ 0.19
COL6A6A6NMZ7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 AC008687.5-201ENST00000593746 558 ntBASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 AC073592.4-201ENST00000623827 446 ntBASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL6A6A6NMZ7 OR8S1-201ENST00000310194 1080 ntBASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 PMPCAP1-201ENST00000508114 1576 ntBASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 AC010654.1-201ENST00000615722 808 ntBASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 AC092902.6-201ENST00000641783 218 ntBASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL6A6A6NMZ7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 AC025678.2-201ENST00000562061 970 ntBASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 AC022145.2-201ENST00000598203 171 ntBASIC16.21■□□□□ 0.19
COL6A6A6NMZ7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms