Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 SDHAP2-201ENST00000455183 2001 ntBASIC15.49■□□□□ 0.07
TMEM235A6NFC5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 AP001094.4-201ENST00000579008 2176 ntBASIC15.49■□□□□ 0.07
TMEM235A6NFC5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 OR6D1P-203ENST00000641209 4860 ntBASIC15.48■□□□□ 0.07
TMEM235A6NFC5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 AC026366.1-201ENST00000488803 879 ntBASIC15.48■□□□□ 0.07
TMEM235A6NFC5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 AC124016.1-201ENST00000609552 612 ntBASIC15.48■□□□□ 0.07
TMEM235A6NFC5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 TNRC18P3-201ENST00000441896 2691 ntBASIC15.48■□□□□ 0.07
TMEM235A6NFC5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 GPAT2P1-201ENST00000444924 1672 ntBASIC15.48■□□□□ 0.07
TMEM235A6NFC5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMEM235A6NFC5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 AC093010.1-201ENST00000473625 1624 ntBASIC15.47■□□□□ 0.07
TMEM235A6NFC5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 KRT16P1-201ENST00000399124 1418 ntBASIC15.47■□□□□ 0.07
TMEM235A6NFC5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 AC104771.1-201ENST00000603335 964 ntBASIC15.47■□□□□ 0.07
TMEM235A6NFC5 AL353708.3-201ENST00000610272 989 ntBASIC15.47■□□□□ 0.07
TMEM235A6NFC5 AC110285.5-201ENST00000611501 352 ntBASIC15.47■□□□□ 0.07
TMEM235A6NFC5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.47■□□□□ 0.07
TMEM235A6NFC5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM235A6NFC5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms