Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.62■□□□□ 0.89
SYCE3A1L190 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.62■□□□□ 0.89
SYCE3A1L190 AC034236.2-201ENST00000606662 1610 ntBASIC20.62■□□□□ 0.89
SYCE3A1L190 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SYCE3A1L190 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SYCE3A1L190 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SYCE3A1L190 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYCE3A1L190 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.61■□□□□ 0.89
SYCE3A1L190 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 PCDH8P1-201ENST00000428983 2773 ntBASIC20.61■□□□□ 0.89
SYCE3A1L190 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SYCE3A1L190 AC004951.3-201ENST00000418645 1148 ntBASIC20.61■□□□□ 0.89
SYCE3A1L190 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.61■□□□□ 0.89
SYCE3A1L190 KRT16P5-201ENST00000455284 522 ntBASIC20.61■□□□□ 0.89
SYCE3A1L190 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.61■□□□□ 0.89
SYCE3A1L190 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.61■□□□□ 0.89
SYCE3A1L190 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.61■□□□□ 0.89
SYCE3A1L190 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYCE3A1L190 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.61■□□□□ 0.89
SYCE3A1L190 AC008403.3-201ENST00000598924 454 ntBASIC20.61■□□□□ 0.89
SYCE3A1L190 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.61■□□□□ 0.89
SYCE3A1L190 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.61■□□□□ 0.89
SYCE3A1L190 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SYCE3A1L190 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SYCE3A1L190 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.61■□□□□ 0.89
SYCE3A1L190 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SYCE3A1L190 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SYCE3A1L190 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.61■□□□□ 0.89
SYCE3A1L190 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.6■□□□□ 0.89
SYCE3A1L190 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
SYCE3A1L190 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.6■□□□□ 0.89
SYCE3A1L190 PKD1P1-201ENST00000458669 6805 ntBASIC20.6■□□□□ 0.89
SYCE3A1L190 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.6■□□□□ 0.89
SYCE3A1L190 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SYCE3A1L190 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SYCE3A1L190 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SYCE3A1L190 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.6■□□□□ 0.89
SYCE3A1L190 AC008040.2-201ENST00000461049 708 ntBASIC20.6■□□□□ 0.89
SYCE3A1L190 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.6■□□□□ 0.89
SYCE3A1L190 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 AL137784.2-201ENST00000607332 1000 ntBASIC20.6■□□□□ 0.89
SYCE3A1L190 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.6■□□□□ 0.89
SYCE3A1L190 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 AC009102.3-201ENST00000623118 1491 ntBASIC20.6■□□□□ 0.89
SYCE3A1L190 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.6■□□□□ 0.89
SYCE3A1L190 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.6■□□□□ 0.89
SYCE3A1L190 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.6■□□□□ 0.89
SYCE3A1L190 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYCE3A1L190 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.6■□□□□ 0.89
SYCE3A1L190 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SYCE3A1L190 PCDHB19P-201ENST00000570871 2371 ntBASIC20.59■□□□□ 0.89
SYCE3A1L190 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYCE3A1L190 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.59■□□□□ 0.89
SYCE3A1L190 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCE3A1L190 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCE3A1L190 AC133963.1-201ENST00000504166 1679 ntBASIC20.59■□□□□ 0.89
SYCE3A1L190 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCE3A1L190 AL023284.2-201ENST00000405850 579 ntBASIC20.59■□□□□ 0.89
SYCE3A1L190 NIFKP9-201ENST00000419265 221 ntBASIC20.59■□□□□ 0.89
SYCE3A1L190 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYCE3A1L190 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.59■□□□□ 0.89
SYCE3A1L190 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SYCE3A1L190 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.59■□□□□ 0.89
SYCE3A1L190 AC233263.1-201ENST00000578059 224 ntBASIC20.59■□□□□ 0.89
SYCE3A1L190 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.59■□□□□ 0.89
SYCE3A1L190 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.59■□□□□ 0.89
SYCE3A1L190 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCE3A1L190 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCE3A1L190 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.59■□□□□ 0.89
SYCE3A1L190 LINC01126-201ENST00000623515 1646 ntBASIC20.59■□□□□ 0.89
SYCE3A1L190 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SYCE3A1L190 AC046158.3-201ENST00000624947 2558 ntBASIC20.59■□□□□ 0.89
SYCE3A1L190 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCE3A1L190 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms