Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 B3GAT3P1-201ENST00000471720 806 ntBASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 AC022211.2-201ENST00000585075 2527 ntBASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 HLA-L-209ENST00000420110 1011 ntBASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 AC090192.1-201ENST00000517740 490 ntBASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 AC026271.3-201ENST00000571884 352 ntBASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 AD000864.1-201ENST00000624076 2295 ntBASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 AL163051.1-201ENST00000569214 1512 ntBASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV5A0A0B4J249 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV5A0A0B4J249 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV5A0A0B4J249 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV5A0A0B4J249 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TRAV5A0A0B4J249 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 AC009102.3-201ENST00000623118 1491 ntBASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 AC073648.6-201ENST00000641589 218 ntBASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 KRT18P55-202ENST00000578578 1546 ntBASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV5A0A0B4J249 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV5A0A0B4J249 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms