Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB9Q9Y5E1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.17■■□□□ 1.62
PCDHB9Q9Y5E1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB9Q9Y5E1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB9Q9Y5E1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDHB9Q9Y5E1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHB9Q9Y5E1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PCDHB9Q9Y5E1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
PCDHB9Q9Y5E1 U85056.1-201ENST00000616429 682 ntBASIC25.15■■□□□ 1.62
PCDHB9Q9Y5E1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHB9Q9Y5E1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHB9Q9Y5E1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHB9Q9Y5E1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.13■■□□□ 1.61
PCDHB9Q9Y5E1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDHB9Q9Y5E1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHB9Q9Y5E1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB9Q9Y5E1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHB9Q9Y5E1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDHB9Q9Y5E1 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHB9Q9Y5E1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB9Q9Y5E1 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHB9Q9Y5E1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB9Q9Y5E1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
PCDHB9Q9Y5E1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB9Q9Y5E1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB9Q9Y5E1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB9Q9Y5E1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB9Q9Y5E1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
PCDHB9Q9Y5E1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB9Q9Y5E1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHB9Q9Y5E1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHB9Q9Y5E1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB9Q9Y5E1 TSPY13P-201ENST00000338964 914 ntBASIC25.09■■□□□ 1.61
PCDHB9Q9Y5E1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PCDHB9Q9Y5E1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB9Q9Y5E1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
PCDHB9Q9Y5E1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
PCDHB9Q9Y5E1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHB9Q9Y5E1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHB9Q9Y5E1 AC126177.7-201ENST00000547904 679 ntBASIC25.08■■□□□ 1.61
PCDHB9Q9Y5E1 AL359258.2-201ENST00000564063 1566 ntBASIC25.08■■□□□ 1.61
PCDHB9Q9Y5E1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.07■■□□□ 1.6
PCDHB9Q9Y5E1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHB9Q9Y5E1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB9Q9Y5E1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.07■■□□□ 1.6
PCDHB9Q9Y5E1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB9Q9Y5E1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB9Q9Y5E1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB9Q9Y5E1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHB9Q9Y5E1 WHAMMP3-201ENST00000611636 1609 ntBASIC25.06■■□□□ 1.6
PCDHB9Q9Y5E1 AC060814.1-201ENST00000554326 538 ntBASIC25.06■■□□□ 1.6
PCDHB9Q9Y5E1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.06■■□□□ 1.6
PCDHB9Q9Y5E1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB9Q9Y5E1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB9Q9Y5E1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB9Q9Y5E1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PCDHB9Q9Y5E1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.05■■□□□ 1.6
PCDHB9Q9Y5E1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PCDHB9Q9Y5E1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.04■■□□□ 1.6
PCDHB9Q9Y5E1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDHB9Q9Y5E1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB9Q9Y5E1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB9Q9Y5E1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB9Q9Y5E1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
PCDHB9Q9Y5E1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB9Q9Y5E1 AC004987.1-201ENST00000428627 508 ntBASIC25.02■■□□□ 1.6
PCDHB9Q9Y5E1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB9Q9Y5E1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB9Q9Y5E1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDHB9Q9Y5E1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
PCDHB9Q9Y5E1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB9Q9Y5E1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB9Q9Y5E1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB9Q9Y5E1 ATP5G2P3-201ENST00000429083 425 ntBASIC25.01■■□□□ 1.59
PCDHB9Q9Y5E1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB9Q9Y5E1 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.01■■□□□ 1.59
PCDHB9Q9Y5E1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB9Q9Y5E1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB9Q9Y5E1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB9Q9Y5E1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB9Q9Y5E1 AL449106.1-201ENST00000608517 1980 ntBASIC25■■□□□ 1.59
PCDHB9Q9Y5E1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHB9Q9Y5E1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHB9Q9Y5E1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
PCDHB9Q9Y5E1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDHB9Q9Y5E1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDHB9Q9Y5E1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB9Q9Y5E1 KRT18P60-201ENST00000312876 1297 ntBASIC24.98■■□□□ 1.59
PCDHB9Q9Y5E1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB9Q9Y5E1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB9Q9Y5E1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHB9Q9Y5E1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHB9Q9Y5E1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
PCDHB9Q9Y5E1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHB9Q9Y5E1 RARRES2P1-201ENST00000474487 481 ntBASIC24.97■■□□□ 1.59
PCDHB9Q9Y5E1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHB9Q9Y5E1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHB9Q9Y5E1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB9Q9Y5E1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDHB9Q9Y5E1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms