Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
NUP50Q9UKX7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.29■■□□□ 1
NUP50Q9UKX7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.29■■□□□ 1
NUP50Q9UKX7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.29■■□□□ 1
NUP50Q9UKX7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NUP50Q9UKX7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.28■■□□□ 1
NUP50Q9UKX7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.27■■□□□ 1
NUP50Q9UKX7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.27■■□□□ 1
NUP50Q9UKX7 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.27■■□□□ 1
NUP50Q9UKX7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NUP50Q9UKX7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NUP50Q9UKX7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NUP50Q9UKX7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NUP50Q9UKX7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NUP50Q9UKX7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NUP50Q9UKX7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.26■□□□□ 0.99
NUP50Q9UKX7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NUP50Q9UKX7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NUP50Q9UKX7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUP50Q9UKX7 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.25■□□□□ 0.99
NUP50Q9UKX7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUP50Q9UKX7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUP50Q9UKX7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
NUP50Q9UKX7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NUP50Q9UKX7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.24■□□□□ 0.99
NUP50Q9UKX7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NUP50Q9UKX7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NUP50Q9UKX7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.24■□□□□ 0.99
NUP50Q9UKX7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.24■□□□□ 0.99
NUP50Q9UKX7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.24■□□□□ 0.99
NUP50Q9UKX7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.24■□□□□ 0.99
NUP50Q9UKX7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.24■□□□□ 0.99
NUP50Q9UKX7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NUP50Q9UKX7 AC010864.1-201ENST00000609407 1511 ntBASIC21.24■□□□□ 0.99
NUP50Q9UKX7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.24■□□□□ 0.99
NUP50Q9UKX7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUP50Q9UKX7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
NUP50Q9UKX7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUP50Q9UKX7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUP50Q9UKX7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
NUP50Q9UKX7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUP50Q9UKX7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUP50Q9UKX7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.22■□□□□ 0.99
NUP50Q9UKX7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.22■□□□□ 0.99
NUP50Q9UKX7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP50Q9UKX7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP50Q9UKX7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUP50Q9UKX7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP50Q9UKX7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NUP50Q9UKX7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP50Q9UKX7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUP50Q9UKX7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
NUP50Q9UKX7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP50Q9UKX7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUP50Q9UKX7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP50Q9UKX7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP50Q9UKX7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP50Q9UKX7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP50Q9UKX7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NUP50Q9UKX7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NUP50Q9UKX7 AC020928.2-201ENST00000588717 2197 ntBASIC21.2■□□□□ 0.98
NUP50Q9UKX7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUP50Q9UKX7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUP50Q9UKX7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUP50Q9UKX7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUP50Q9UKX7 HSD17B1P1-201ENST00000590052 955 ntBASIC21.19■□□□□ 0.98
NUP50Q9UKX7 LINC00273-201ENST00000539813 1452 ntBASIC21.19■□□□□ 0.98
NUP50Q9UKX7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.18■□□□□ 0.98
NUP50Q9UKX7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.18■□□□□ 0.98
NUP50Q9UKX7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP50Q9UKX7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUP50Q9UKX7 AC133561.1-201ENST00000568600 2415 ntBASIC21.18■□□□□ 0.98
NUP50Q9UKX7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUP50Q9UKX7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.18■□□□□ 0.98
NUP50Q9UKX7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP50Q9UKX7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
NUP50Q9UKX7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP50Q9UKX7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP50Q9UKX7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP50Q9UKX7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NUP50Q9UKX7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NUP50Q9UKX7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP50Q9UKX7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP50Q9UKX7 CLDN5-201ENST00000403084 2357 ntBASIC21.16■□□□□ 0.98
NUP50Q9UKX7 AC012676.1-201ENST00000574705 1949 ntBASIC21.16■□□□□ 0.98
NUP50Q9UKX7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUP50Q9UKX7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.16■□□□□ 0.98
NUP50Q9UKX7 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.16■□□□□ 0.98
NUP50Q9UKX7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP50Q9UKX7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUP50Q9UKX7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP50Q9UKX7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP50Q9UKX7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP50Q9UKX7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP50Q9UKX7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP50Q9UKX7 DRD5P2-201ENST00000421395 2012 ntBASIC21.15■□□□□ 0.98
NUP50Q9UKX7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP50Q9UKX7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NUP50Q9UKX7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.14■□□□□ 0.97
NUP50Q9UKX7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms