Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
RNF39Q9H2S5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
RNF39Q9H2S5 DRD5P2-201ENST00000421395 2012 ntBASIC27.06■■□□□ 1.92
RNF39Q9H2S5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RNF39Q9H2S5 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
RNF39Q9H2S5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
RNF39Q9H2S5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RNF39Q9H2S5 AC012354.3-201ENST00000623734 483 ntBASIC27.04■■□□□ 1.92
RNF39Q9H2S5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RNF39Q9H2S5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.04■■□□□ 1.92
RNF39Q9H2S5 KRT18P60-201ENST00000312876 1297 ntBASIC27.03■■□□□ 1.92
RNF39Q9H2S5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
RNF39Q9H2S5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RNF39Q9H2S5 AC007029.1-201ENST00000604183 313 ntBASIC27.03■■□□□ 1.92
RNF39Q9H2S5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.03■■□□□ 1.92
RNF39Q9H2S5 SMPD5-203ENST00000639008 1464 ntBASIC27.03■■□□□ 1.92
RNF39Q9H2S5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
RNF39Q9H2S5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RNF39Q9H2S5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.02■■□□□ 1.92
RNF39Q9H2S5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.02■■□□□ 1.92
RNF39Q9H2S5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
RNF39Q9H2S5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
RNF39Q9H2S5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27■■□□□ 1.91
RNF39Q9H2S5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27■■□□□ 1.91
RNF39Q9H2S5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RNF39Q9H2S5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RNF39Q9H2S5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.99■■□□□ 1.91
RNF39Q9H2S5 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC26.99■■□□□ 1.91
RNF39Q9H2S5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RNF39Q9H2S5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.99■■□□□ 1.91
RNF39Q9H2S5 AC120057.1-201ENST00000483947 663 ntBASIC26.99■■□□□ 1.91
RNF39Q9H2S5 AL033527.3-201ENST00000566366 1196 ntBASIC26.99■■□□□ 1.91
RNF39Q9H2S5 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC26.99■■□□□ 1.91
RNF39Q9H2S5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
RNF39Q9H2S5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF39Q9H2S5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.98■■□□□ 1.91
RNF39Q9H2S5 AC025884.2-201ENST00000553429 711 ntBASIC26.98■■□□□ 1.91
RNF39Q9H2S5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RNF39Q9H2S5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
RNF39Q9H2S5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF39Q9H2S5 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.97■■□□□ 1.91
RNF39Q9H2S5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.97■■□□□ 1.91
RNF39Q9H2S5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
RNF39Q9H2S5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF39Q9H2S5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
RNF39Q9H2S5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF39Q9H2S5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RNF39Q9H2S5 RN7SL602P-201ENST00000578326 324 ntBASIC26.96■■□□□ 1.91
RNF39Q9H2S5 AC009831.1-201ENST00000580420 1582 ntBASIC26.96■■□□□ 1.91
RNF39Q9H2S5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
RNF39Q9H2S5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
RNF39Q9H2S5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.95■■□□□ 1.9
RNF39Q9H2S5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RNF39Q9H2S5 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RNF39Q9H2S5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
RNF39Q9H2S5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
RNF39Q9H2S5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
RNF39Q9H2S5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RNF39Q9H2S5 AC004987.1-201ENST00000428627 508 ntBASIC26.93■■□□□ 1.9
RNF39Q9H2S5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RNF39Q9H2S5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.92■■□□□ 1.9
RNF39Q9H2S5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC26.92■■□□□ 1.9
RNF39Q9H2S5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RNF39Q9H2S5 AC133552.2-201ENST00000619106 1032 ntBASIC26.92■■□□□ 1.9
RNF39Q9H2S5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.92■■□□□ 1.9
RNF39Q9H2S5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF39Q9H2S5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RNF39Q9H2S5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF39Q9H2S5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF39Q9H2S5 AL592293.1-201ENST00000502889 1188 ntBASIC26.9■■□□□ 1.9
RNF39Q9H2S5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RNF39Q9H2S5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.9■■□□□ 1.9
RNF39Q9H2S5 AC026202.3-201ENST00000600805 1127 ntBASIC26.9■■□□□ 1.9
RNF39Q9H2S5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RNF39Q9H2S5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RNF39Q9H2S5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RNF39Q9H2S5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.89■■□□□ 1.9
RNF39Q9H2S5 TMEM14EP-202ENST00000639378 1296 ntBASIC26.89■■□□□ 1.9
RNF39Q9H2S5 WHAMMP3-201ENST00000611636 1609 ntBASIC26.89■■□□□ 1.9
RNF39Q9H2S5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
RNF39Q9H2S5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
RNF39Q9H2S5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RNF39Q9H2S5 ATP5G2P3-201ENST00000429083 425 ntBASIC26.88■■□□□ 1.89
RNF39Q9H2S5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
RNF39Q9H2S5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
RNF39Q9H2S5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.87■■□□□ 1.89
RNF39Q9H2S5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF39Q9H2S5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF39Q9H2S5 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RNF39Q9H2S5 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.87■■□□□ 1.89
RNF39Q9H2S5 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC26.87■■□□□ 1.89
RNF39Q9H2S5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
RNF39Q9H2S5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
RNF39Q9H2S5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF39Q9H2S5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
RNF39Q9H2S5 AL359504.2-201ENST00000605506 1601 ntBASIC26.87■■□□□ 1.89
RNF39Q9H2S5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF39Q9H2S5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF39Q9H2S5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF39Q9H2S5 AC129492.7-201ENST00000622992 756 ntBASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms