Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRDL1Q9BU40 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRDL1Q9BU40 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRDL1Q9BU40 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRDL1Q9BU40 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDL1Q9BU40 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHRDL1Q9BU40 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRDL1Q9BU40 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CHRDL1Q9BU40 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRDL1Q9BU40 AL449106.1-201ENST00000608517 1980 ntBASIC19.41■□□□□ 0.7
CHRDL1Q9BU40 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDL1Q9BU40 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRDL1Q9BU40 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHRDL1Q9BU40 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L13-201ENST00000554103 1267 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L15-201ENST00000611059 1267 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L11-201ENST00000611504 1267 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L12-201ENST00000614593 1267 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L23-201ENST00000615195 1269 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L24-201ENST00000617576 1269 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L22-201ENST00000618238 1269 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L20-201ENST00000619712 1269 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L14-201ENST00000621227 1267 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L21-201ENST00000622058 1269 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L10-201ENST00000622460 1267 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 DUX4L25-201ENST00000624915 1269 ntBASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRDL1Q9BU40 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHRDL1Q9BU40 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRDL1Q9BU40 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRDL1Q9BU40 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRDL1Q9BU40 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRDL1Q9BU40 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHRDL1Q9BU40 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHRDL1Q9BU40 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRDL1Q9BU40 ABHD17AP4-201ENST00000411545 909 ntBASIC19.38■□□□□ 0.69
CHRDL1Q9BU40 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRDL1Q9BU40 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRDL1Q9BU40 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CHRDL1Q9BU40 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.37■□□□□ 0.69
CHRDL1Q9BU40 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRDL1Q9BU40 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CHRDL1Q9BU40 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRDL1Q9BU40 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRDL1Q9BU40 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRDL1Q9BU40 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRDL1Q9BU40 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRDL1Q9BU40 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRDL1Q9BU40 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.36■□□□□ 0.69
CHRDL1Q9BU40 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
CHRDL1Q9BU40 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CHRDL1Q9BU40 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRDL1Q9BU40 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRDL1Q9BU40 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRDL1Q9BU40 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRDL1Q9BU40 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHRDL1Q9BU40 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRDL1Q9BU40 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRDL1Q9BU40 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRDL1Q9BU40 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
CHRDL1Q9BU40 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRDL1Q9BU40 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.34■□□□□ 0.69
CHRDL1Q9BU40 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRDL1Q9BU40 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRDL1Q9BU40 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHRDL1Q9BU40 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CHRDL1Q9BU40 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CHRDL1Q9BU40 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHRDL1Q9BU40 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRDL1Q9BU40 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHRDL1Q9BU40 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRDL1Q9BU40 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRDL1Q9BU40 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHRDL1Q9BU40 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHRDL1Q9BU40 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHRDL1Q9BU40 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.31■□□□□ 0.68
CHRDL1Q9BU40 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHRDL1Q9BU40 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CHRDL1Q9BU40 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRDL1Q9BU40 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHRDL1Q9BU40 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRDL1Q9BU40 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.3■□□□□ 0.68
CHRDL1Q9BU40 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRDL1Q9BU40 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.3■□□□□ 0.68
CHRDL1Q9BU40 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRDL1Q9BU40 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRDL1Q9BU40 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHRDL1Q9BU40 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRDL1Q9BU40 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRDL1Q9BU40 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRDL1Q9BU40 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRDL1Q9BU40 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRDL1Q9BU40 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRDL1Q9BU40 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRDL1Q9BU40 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms