Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.16■□□□□ 0.66
DUX3Q96PT4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DUX3Q96PT4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DUX3Q96PT4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.16■□□□□ 0.66
DUX3Q96PT4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DUX3Q96PT4 AC012354.3-201ENST00000623734 483 ntBASIC19.16■□□□□ 0.66
DUX3Q96PT4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DUX3Q96PT4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX3Q96PT4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX3Q96PT4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DUX3Q96PT4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
DUX3Q96PT4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DUX3Q96PT4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DUX3Q96PT4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DUX3Q96PT4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DUX3Q96PT4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DUX3Q96PT4 AC018358.1-201ENST00000631079 1402 ntBASIC19.14■□□□□ 0.65
DUX3Q96PT4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DUX3Q96PT4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DUX3Q96PT4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX3Q96PT4 AL033527.3-201ENST00000566366 1196 ntBASIC19.13■□□□□ 0.65
DUX3Q96PT4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DUX3Q96PT4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX3Q96PT4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX3Q96PT4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.13■□□□□ 0.65
DUX3Q96PT4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX3Q96PT4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DUX3Q96PT4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.12■□□□□ 0.65
DUX3Q96PT4 SMPD5-203ENST00000639008 1464 ntBASIC19.12■□□□□ 0.65
DUX3Q96PT4 KRT18P60-201ENST00000312876 1297 ntBASIC19.12■□□□□ 0.65
DUX3Q96PT4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DUX3Q96PT4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DUX3Q96PT4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DUX3Q96PT4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DUX3Q96PT4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
DUX3Q96PT4 AC007029.1-201ENST00000604183 313 ntBASIC19.11■□□□□ 0.65
DUX3Q96PT4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
DUX3Q96PT4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
DUX3Q96PT4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DUX3Q96PT4 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.1■□□□□ 0.65
DUX3Q96PT4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DUX3Q96PT4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DUX3Q96PT4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
DUX3Q96PT4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DUX3Q96PT4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
DUX3Q96PT4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.1■□□□□ 0.65
DUX3Q96PT4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
DUX3Q96PT4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DUX3Q96PT4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DUX3Q96PT4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
DUX3Q96PT4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DUX3Q96PT4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.08■□□□□ 0.65
DUX3Q96PT4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.08■□□□□ 0.65
DUX3Q96PT4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.08■□□□□ 0.65
DUX3Q96PT4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DUX3Q96PT4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.08■□□□□ 0.64
DUX3Q96PT4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DUX3Q96PT4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
DUX3Q96PT4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.07■□□□□ 0.64
DUX3Q96PT4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.07■□□□□ 0.64
DUX3Q96PT4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DUX3Q96PT4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DUX3Q96PT4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DUX3Q96PT4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX3Q96PT4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.06■□□□□ 0.64
DUX3Q96PT4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DUX3Q96PT4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DUX3Q96PT4 AC133552.2-201ENST00000619106 1032 ntBASIC19.06■□□□□ 0.64
DUX3Q96PT4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX3Q96PT4 AC009831.1-201ENST00000580420 1582 ntBASIC19.06■□□□□ 0.64
DUX3Q96PT4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DUX3Q96PT4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX3Q96PT4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DUX3Q96PT4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX3Q96PT4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX3Q96PT4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DUX3Q96PT4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.04■□□□□ 0.64
DUX3Q96PT4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DUX3Q96PT4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DUX3Q96PT4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX3Q96PT4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX3Q96PT4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.04■□□□□ 0.64
DUX3Q96PT4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DUX3Q96PT4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.04■□□□□ 0.64
DUX3Q96PT4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DUX3Q96PT4 AC004987.1-201ENST00000428627 508 ntBASIC19.04■□□□□ 0.64
DUX3Q96PT4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DUX3Q96PT4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.04■□□□□ 0.64
DUX3Q96PT4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.04■□□□□ 0.64
DUX3Q96PT4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.04■□□□□ 0.64
DUX3Q96PT4 AL592293.1-201ENST00000502889 1188 ntBASIC19.04■□□□□ 0.64
DUX3Q96PT4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.04■□□□□ 0.64
DUX3Q96PT4 WHAMMP3-201ENST00000611636 1609 ntBASIC19.03■□□□□ 0.64
DUX3Q96PT4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DUX3Q96PT4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DUX3Q96PT4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DUX3Q96PT4 AC025884.2-201ENST00000553429 711 ntBASIC19.03■□□□□ 0.64
DUX3Q96PT4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.03■□□□□ 0.64
DUX3Q96PT4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
DUX3Q96PT4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms