Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.77■□□□□ 0.92
NEIL1Q96FI4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEIL1Q96FI4 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.77■□□□□ 0.92
NEIL1Q96FI4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEIL1Q96FI4 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.77■□□□□ 0.92
NEIL1Q96FI4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NEIL1Q96FI4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.77■□□□□ 0.91
NEIL1Q96FI4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NEIL1Q96FI4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
NEIL1Q96FI4 RARRES2P2-201ENST00000394842 485 ntBASIC20.76■□□□□ 0.91
NEIL1Q96FI4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.76■□□□□ 0.91
NEIL1Q96FI4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEIL1Q96FI4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEIL1Q96FI4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEIL1Q96FI4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NEIL1Q96FI4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NEIL1Q96FI4 AL359258.2-201ENST00000564063 1566 ntBASIC20.74■□□□□ 0.91
NEIL1Q96FI4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEIL1Q96FI4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEIL1Q96FI4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEIL1Q96FI4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NEIL1Q96FI4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NEIL1Q96FI4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NEIL1Q96FI4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NEIL1Q96FI4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
NEIL1Q96FI4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEIL1Q96FI4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NEIL1Q96FI4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEIL1Q96FI4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NEIL1Q96FI4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEIL1Q96FI4 AC092296.2-201ENST00000589470 999 ntBASIC20.71■□□□□ 0.91
NEIL1Q96FI4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEIL1Q96FI4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEIL1Q96FI4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NEIL1Q96FI4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEIL1Q96FI4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.7■□□□□ 0.9
NEIL1Q96FI4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEIL1Q96FI4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEIL1Q96FI4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
NEIL1Q96FI4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEIL1Q96FI4 ECEL1P2-201ENST00000461596 1295 ntBASIC20.69■□□□□ 0.9
NEIL1Q96FI4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEIL1Q96FI4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEIL1Q96FI4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.68■□□□□ 0.9
NEIL1Q96FI4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.68■□□□□ 0.9
NEIL1Q96FI4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEIL1Q96FI4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEIL1Q96FI4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEIL1Q96FI4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEIL1Q96FI4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEIL1Q96FI4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.67■□□□□ 0.9
NEIL1Q96FI4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.66■□□□□ 0.9
NEIL1Q96FI4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEIL1Q96FI4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEIL1Q96FI4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEIL1Q96FI4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEIL1Q96FI4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEIL1Q96FI4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEIL1Q96FI4 AL157400.5-201ENST00000507624 621 ntBASIC20.65■□□□□ 0.9
NEIL1Q96FI4 ABHD17AP5-201ENST00000580133 923 ntBASIC20.65■□□□□ 0.9
NEIL1Q96FI4 LINC01003-201ENST00000564834 1764 ntBASIC20.64■□□□□ 0.9
NEIL1Q96FI4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.64■□□□□ 0.9
NEIL1Q96FI4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NEIL1Q96FI4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NEIL1Q96FI4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.64■□□□□ 0.89
NEIL1Q96FI4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.64■□□□□ 0.89
NEIL1Q96FI4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEIL1Q96FI4 WHAMMP3-201ENST00000611636 1609 ntBASIC20.64■□□□□ 0.89
NEIL1Q96FI4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEIL1Q96FI4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NEIL1Q96FI4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEIL1Q96FI4 AC135731.1-201ENST00000569415 2548 ntBASIC20.63■□□□□ 0.89
NEIL1Q96FI4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.63■□□□□ 0.89
NEIL1Q96FI4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NEIL1Q96FI4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NEIL1Q96FI4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.62■□□□□ 0.89
NEIL1Q96FI4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.62■□□□□ 0.89
NEIL1Q96FI4 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.62■□□□□ 0.89
NEIL1Q96FI4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.62■□□□□ 0.89
NEIL1Q96FI4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEIL1Q96FI4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEIL1Q96FI4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEIL1Q96FI4 AL121749.1-202ENST00000609313 2153 ntBASIC20.62■□□□□ 0.89
NEIL1Q96FI4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEIL1Q96FI4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.61■□□□□ 0.89
NEIL1Q96FI4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEIL1Q96FI4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEIL1Q96FI4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEIL1Q96FI4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEIL1Q96FI4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.6■□□□□ 0.89
NEIL1Q96FI4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEIL1Q96FI4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEIL1Q96FI4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEIL1Q96FI4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.59■□□□□ 0.89
NEIL1Q96FI4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEIL1Q96FI4 BX255925.1-201ENST00000566954 1854 ntBASIC20.58■□□□□ 0.89
NEIL1Q96FI4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEIL1Q96FI4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEIL1Q96FI4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEIL1Q96FI4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms