Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01561Q8N1V8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.54■□□□□ 0.24
LINC01561Q8N1V8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01561Q8N1V8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01561Q8N1V8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC01561Q8N1V8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01561Q8N1V8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
LINC01561Q8N1V8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01561Q8N1V8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01561Q8N1V8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01561Q8N1V8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01561Q8N1V8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC01561Q8N1V8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01561Q8N1V8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01561Q8N1V8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01561Q8N1V8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC01561Q8N1V8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01561Q8N1V8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01561Q8N1V8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LINC01561Q8N1V8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01561Q8N1V8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC01561Q8N1V8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01561Q8N1V8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01561Q8N1V8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LINC01561Q8N1V8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01561Q8N1V8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01561Q8N1V8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
LINC01561Q8N1V8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LINC01561Q8N1V8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01561Q8N1V8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01561Q8N1V8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01561Q8N1V8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC01561Q8N1V8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01561Q8N1V8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LINC01561Q8N1V8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01561Q8N1V8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LINC01561Q8N1V8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01561Q8N1V8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01561Q8N1V8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01561Q8N1V8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC01561Q8N1V8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01561Q8N1V8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01561Q8N1V8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01561Q8N1V8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LINC01561Q8N1V8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01561Q8N1V8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01561Q8N1V8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01561Q8N1V8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01561Q8N1V8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01561Q8N1V8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01561Q8N1V8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01561Q8N1V8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
LINC01561Q8N1V8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC01561Q8N1V8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01561Q8N1V8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC01561Q8N1V8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC01561Q8N1V8 AC010501.1-201ENST00000606270 1962 ntBASIC16.45■□□□□ 0.22
LINC01561Q8N1V8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01561Q8N1V8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC01561Q8N1V8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC01561Q8N1V8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01561Q8N1V8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01561Q8N1V8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01561Q8N1V8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC01561Q8N1V8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01561Q8N1V8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC01561Q8N1V8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01561Q8N1V8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01561Q8N1V8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.43■□□□□ 0.22
LINC01561Q8N1V8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01561Q8N1V8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LINC01561Q8N1V8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
LINC01561Q8N1V8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01561Q8N1V8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01561Q8N1V8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01561Q8N1V8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC01561Q8N1V8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LINC01561Q8N1V8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01561Q8N1V8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC01561Q8N1V8 AC087741.3-201ENST00000624270 1347 ntBASIC16.42■□□□□ 0.22
LINC01561Q8N1V8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LINC01561Q8N1V8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LINC01561Q8N1V8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01561Q8N1V8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.41■□□□□ 0.22
LINC01561Q8N1V8 AC044849.2-201ENST00000606596 710 ntBASIC16.41■□□□□ 0.22
LINC01561Q8N1V8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC01561Q8N1V8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC01561Q8N1V8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01561Q8N1V8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms