Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 BDF2YDL070W 1917 nt7.68□□□□□ -1.18
SSL2Q00578 HEM2YGL040C 1029 nt7.68□□□□□ -1.18
SSL2Q00578 YIP4YGL198W 708 nt7.68□□□□□ -1.18
SSL2Q00578 COX16YJL003W 357 nt7.68□□□□□ -1.18
SSL2Q00578 REC107YJR021C 945 nt7.68□□□□□ -1.18
SSL2Q00578 RDN5-2RDN5-2 119 nt7.68□□□□□ -1.18
SSL2Q00578 RDN5-3RDN5-3 119 nt7.68□□□□□ -1.18
SSL2Q00578 RDN5-4RDN5-4 119 nt7.68□□□□□ -1.18
SSL2Q00578 RDN5-5RDN5-5 119 nt7.68□□□□□ -1.18
SSL2Q00578 RPL31BYLR406C 342 nt7.68□□□□□ -1.18
SSL2Q00578 RPL5YPL131W 894 nt7.68□□□□□ -1.18
SSL2Q00578 PPH22YDL188C 1134 nt7.67□□□□□ -1.18
SSL2Q00578 HSP12YFL014W 330 nt7.67□□□□□ -1.18
SSL2Q00578 SPG5YMR191W 1122 nt7.67□□□□□ -1.18
SSL2Q00578 YPL041CYPL041C 624 nt7.67□□□□□ -1.18
SSL2Q00578 YEL023CYEL023C 2049 nt7.67□□□□□ -1.18
SSL2Q00578 NAF1YNL124W 1479 nt7.67□□□□□ -1.18
SSL2Q00578 YPR204WYPR204W 3099 nt7.66□□□□□ -1.18
SSL2Q00578 YPQ1YOL092W 927 nt7.66□□□□□ -1.18
SSL2Q00578 YPL067CYPL067C 597 nt7.66□□□□□ -1.18
SSL2Q00578 SKY1YMR216C 2229 nt7.66□□□□□ -1.18
SSL2Q00578 OPI11YPR044C 354 nt7.65□□□□□ -1.18
SSL2Q00578 snR30snR30 606 nt7.65□□□□□ -1.18
SSL2Q00578 EDC3YEL015W 1656 nt7.64□□□□□ -1.19
SSL2Q00578 OPI8YKR035C 642 nt7.64□□□□□ -1.19
SSL2Q00578 NTG2YOL043C 1143 nt7.64□□□□□ -1.19
SSL2Q00578 MPE1YKL059C 1326 nt7.63□□□□□ -1.19
SSL2Q00578 AI5_BETAQ0075 1065 nt7.63□□□□□ -1.19
SSL2Q00578 TOM20YGR082W 552 nt7.63□□□□□ -1.19
SSL2Q00578 YAL016C-AYAL016C-A 315 nt7.63□□□□□ -1.19
SSL2Q00578 YCL049CYCL049C 939 nt7.63□□□□□ -1.19
SSL2Q00578 ARG81YML099C 2643 nt7.63□□□□□ -1.19
SSL2Q00578 IRC11YOR013W 471 nt7.61□□□□□ -1.19
SSL2Q00578 YPQ2YDR352W 954 nt7.6□□□□□ -1.19
SSL2Q00578 GET4YOR164C 939 nt7.6□□□□□ -1.19
SSL2Q00578 FCY22YER060W-A 1593 nt7.59□□□□□ -1.19
SSL2Q00578 CIA1YDR267C 993 nt7.59□□□□□ -1.19
SSL2Q00578 MRPS28YDR337W 861 nt7.59□□□□□ -1.19
SSL2Q00578 YFL013W-AYFL013W-A 804 nt7.59□□□□□ -1.19
SSL2Q00578 BUD20YLR074C 501 nt7.59□□□□□ -1.19
SSL2Q00578 TOS6YNL300W 309 nt7.58□□□□□ -1.2
SSL2Q00578 YPL247CYPL247C 1572 nt7.58□□□□□ -1.2
SSL2Q00578 COG1YGL223C 1254 nt7.57□□□□□ -1.2
SSL2Q00578 YNR005CYNR005C 405 nt7.57□□□□□ -1.2
SSL2Q00578 VBA5YKR105C 1749 nt7.57□□□□□ -1.2
SSL2Q00578 STT3YGL022W 2157 nt7.56□□□□□ -1.2
SSL2Q00578 YSC83YHR017W 1158 nt7.56□□□□□ -1.2
SSL2Q00578 ARP3YJR065C 1350 nt7.56□□□□□ -1.2
SSL2Q00578 DML1YMR211W 1428 nt7.55□□□□□ -1.2
SSL2Q00578 BUR6YER159C 429 nt7.55□□□□□ -1.2
SSL2Q00578 CTF8YHR191C 402 nt7.55□□□□□ -1.2
SSL2Q00578 YJR107WYJR107W 987 nt7.55□□□□□ -1.2
SSL2Q00578 SEC62YPL094C 825 nt7.55□□□□□ -1.2
SSL2Q00578 APE4YHR113W 1473 nt7.55□□□□□ -1.2
SSL2Q00578 GLN3YER040W 2193 nt7.54□□□□□ -1.2
SSL2Q00578 HEM1YDR232W 1647 nt7.54□□□□□ -1.2
SSL2Q00578 YDL177CYDL177C 513 nt7.54□□□□□ -1.2
SSL2Q00578 SUR7YML052W 909 nt7.54□□□□□ -1.2
SSL2Q00578 HTZ1YOL012C 405 nt7.54□□□□□ -1.2
SSL2Q00578 TUB1YML085C 1344 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)BtG(GCC)B 71 nt7.53□□□□□ -1.2
SSL2Q00578 SUF16tG(GCC)C 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)D1tG(GCC)D1 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)D2tG(GCC)D2 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)EtG(GCC)E 71 nt7.53□□□□□ -1.2
SSL2Q00578 SUF20tG(GCC)F1 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)F2tG(GCC)F2 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)G1tG(GCC)G1 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)G2tG(GCC)G2 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)J1tG(GCC)J1 71 nt7.53□□□□□ -1.2
SSL2Q00578 SUF23tG(GCC)J2 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)MtG(GCC)M 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)O1tG(GCC)O1 71 nt7.53□□□□□ -1.2
SSL2Q00578 SUF17tG(GCC)O2 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)P1tG(GCC)P1 71 nt7.53□□□□□ -1.2
SSL2Q00578 tG(GCC)P2tG(GCC)P2 71 nt7.53□□□□□ -1.2
SSL2Q00578 EDC2YER035W 438 nt7.53□□□□□ -1.2
SSL2Q00578 PTH2YBL057C 627 nt7.53□□□□□ -1.2
SSL2Q00578 ACO1YLR304C 2337 nt7.52□□□□□ -1.2
SSL2Q00578 TRR2YHR106W 1029 nt7.52□□□□□ -1.21
SSL2Q00578 ECM30YLR436C 3825 nt7.52□□□□□ -1.21
SSL2Q00578 YTH1YPR107C 627 nt7.52□□□□□ -1.21
SSL2Q00578 DID2YKR035W-A 615 nt7.51□□□□□ -1.21
SSL2Q00578 YNL067W-AYNL067W-A 147 nt7.51□□□□□ -1.21
SSL2Q00578 CST26YBR042C 1194 nt7.51□□□□□ -1.21
SSL2Q00578 ADH5YBR145W 1056 nt7.51□□□□□ -1.21
SSL2Q00578 YKR023WYKR023W 1593 nt7.5□□□□□ -1.21
SSL2Q00578 DOT1YDR440W 1749 nt7.5□□□□□ -1.21
SSL2Q00578 PRI1YIR008C 1230 nt7.5□□□□□ -1.21
SSL2Q00578 ICP55YER078C 1536 nt7.5□□□□□ -1.21
SSL2Q00578 MSC3YLR219W 2187 nt7.5□□□□□ -1.21
SSL2Q00578 GUT1YHL032C 2130 nt7.49□□□□□ -1.21
SSL2Q00578 HIS1YER055C 894 nt7.49□□□□□ -1.21
SSL2Q00578 PTC7YHR076W 1032 nt7.49□□□□□ -1.21
SSL2Q00578 SMX3YPR182W 261 nt7.49□□□□□ -1.21
SSL2Q00578 CLN1YMR199W 1641 nt7.49□□□□□ -1.21
SSL2Q00578 YHR020WYHR020W 2067 nt7.48□□□□□ -1.21
SSL2Q00578 GCN3YKR026C 918 nt7.48□□□□□ -1.21
SSL2Q00578 COX5AYNL052W 462 nt7.48□□□□□ -1.21
SSL2Q00578 DFR1YOR236W 636 nt7.48□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms