Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 YPQ2YDR352W 954 nt6.06□□□□□ -1.44
UFD1P53044 SMK1YPR054W 1167 nt6.06□□□□□ -1.44
UFD1P53044 POP1YNL221C 2628 nt6.06□□□□□ -1.44
UFD1P53044 CYC8YBR112C 2901 nt6.05□□□□□ -1.44
UFD1P53044 ERS1YCR075C 783 nt6.05□□□□□ -1.44
UFD1P53044 PUP2YGR253C 783 nt6.05□□□□□ -1.44
UFD1P53044 MIX17YMR002W 471 nt6.05□□□□□ -1.44
UFD1P53044 RPR1RPR1 369 nt6.05□□□□□ -1.44
UFD1P53044 HBN1YCL026C-B 582 nt6.05□□□□□ -1.44
UFD1P53044 NMT1YLR195C 1368 nt6.05□□□□□ -1.44
UFD1P53044 GSH1YJL101C 2037 nt6.04□□□□□ -1.44
UFD1P53044 PTH2YBL057C 627 nt6.04□□□□□ -1.44
UFD1P53044 LAT1YNL071W 1449 nt6.04□□□□□ -1.44
UFD1P53044 GPH1YPR160W 2709 nt6.04□□□□□ -1.44
UFD1P53044 CCT3YJL014W 1605 nt6.03□□□□□ -1.44
UFD1P53044 HXK2YGL253W 1461 nt6.03□□□□□ -1.44
UFD1P53044 NFS1YCL017C 1494 nt6.03□□□□□ -1.44
UFD1P53044 TUB1YML085C 1344 nt6.03□□□□□ -1.44
UFD1P53044 THR1YHR025W 1074 nt6.03□□□□□ -1.44
UFD1P53044 GLN3YER040W 2193 nt6.03□□□□□ -1.44
UFD1P53044 YAL019W-AYAL019W-A 570 nt6.02□□□□□ -1.45
UFD1P53044 YAL045CYAL045C 309 nt6.02□□□□□ -1.45
UFD1P53044 YNL200CYNL200C 741 nt6.02□□□□□ -1.45
UFD1P53044 OPI11YPR044C 354 nt6.02□□□□□ -1.45
UFD1P53044 DLD1YDL174C 1764 nt6.02□□□□□ -1.45
UFD1P53044 GYP8YFL027C 1494 nt6.02□□□□□ -1.45
UFD1P53044 CEM1YER061C 1329 nt6.01□□□□□ -1.45
UFD1P53044 DML1YMR211W 1428 nt6.01□□□□□ -1.45
UFD1P53044 CTA1YDR256C 1548 nt6.01□□□□□ -1.45
UFD1P53044 IRC5YFR038W 2562 nt6.01□□□□□ -1.45
UFD1P53044 MRPL28YDR462W 444 nt6.01□□□□□ -1.45
UFD1P53044 YBR241CYBR241C 1467 nt6.01□□□□□ -1.45
UFD1P53044 YGR127WYGR127W 939 nt6□□□□□ -1.45
UFD1P53044 MSG5YNL053W 1470 nt6□□□□□ -1.45
UFD1P53044 YPL247CYPL247C 1572 nt6□□□□□ -1.45
UFD1P53044 AVT4YNL101W 2142 nt5.99□□□□□ -1.45
UFD1P53044 FCY22YER060W-A 1593 nt5.99□□□□□ -1.45
UFD1P53044 ARP3YJR065C 1350 nt5.99□□□□□ -1.45
UFD1P53044 YCR049CYCR049C 447 nt5.99□□□□□ -1.45
UFD1P53044 HPT1YDR399W 666 nt5.99□□□□□ -1.45
UFD1P53044 YLL066CYLL066C 3618 nt5.99□□□□□ -1.45
UFD1P53044 MPE1YKL059C 1326 nt5.99□□□□□ -1.45
UFD1P53044 FET4YMR319C 1659 nt5.98□□□□□ -1.45
UFD1P53044 HGH1YGR187C 1185 nt5.98□□□□□ -1.45
UFD1P53044 RDN5-2RDN5-2 119 nt5.98□□□□□ -1.45
UFD1P53044 RDN5-3RDN5-3 119 nt5.98□□□□□ -1.45
UFD1P53044 RDN5-4RDN5-4 119 nt5.98□□□□□ -1.45
UFD1P53044 RDN5-5RDN5-5 119 nt5.98□□□□□ -1.45
UFD1P53044 YOX1YML027W 1158 nt5.98□□□□□ -1.45
UFD1P53044 PRS4YBL068W 981 nt5.98□□□□□ -1.45
UFD1P53044 YPL067CYPL067C 597 nt5.98□□□□□ -1.45
UFD1P53044 EFT2YDR385W 2529 nt5.98□□□□□ -1.45
UFD1P53044 EFT1YOR133W 2529 nt5.98□□□□□ -1.45
UFD1P53044 UME1YPL139C 1383 nt5.97□□□□□ -1.45
UFD1P53044 HAL5YJL165C 2568 nt5.97□□□□□ -1.45
UFD1P53044 COX16YJL003W 357 nt5.97□□□□□ -1.45
UFD1P53044 OPI8YKR035C 642 nt5.97□□□□□ -1.45
UFD1P53044 PXL1YKR090W 2121 nt5.97□□□□□ -1.45
UFD1P53044 SUR7YML052W 909 nt5.97□□□□□ -1.45
UFD1P53044 YNR014WYNR014W 639 nt5.97□□□□□ -1.45
UFD1P53044 ALT2YDR111C 1524 nt5.97□□□□□ -1.45
UFD1P53044 CEF1YMR213W 1773 nt5.97□□□□□ -1.45
UFD1P53044 LAG2YOL025W 1983 nt5.97□□□□□ -1.45
UFD1P53044 snR82snR82 268 nt5.96□□□□□ -1.46
UFD1P53044 THI4YGR144W 981 nt5.96□□□□□ -1.46
UFD1P53044 TRR2YHR106W 1029 nt5.96□□□□□ -1.46
UFD1P53044 CTF8YHR191C 402 nt5.96□□□□□ -1.46
UFD1P53044 COS10YNR075W 1125 nt5.96□□□□□ -1.46
UFD1P53044 YOL099CYOL099C 492 nt5.96□□□□□ -1.46
UFD1P53044 PLB2YMR006C 2121 nt5.96□□□□□ -1.46
UFD1P53044 YHR131CYHR131C 2553 nt5.96□□□□□ -1.46
UFD1P53044 YIL055CYIL055C 1884 nt5.95□□□□□ -1.46
UFD1P53044 YPQ1YOL092W 927 nt5.95□□□□□ -1.46
UFD1P53044 CST26YBR042C 1194 nt5.95□□□□□ -1.46
UFD1P53044 YPR130CYPR130C 408 nt5.95□□□□□ -1.46
UFD1P53044 BDF2YDL070W 1917 nt5.95□□□□□ -1.46
UFD1P53044 URA1YKL216W 945 nt5.94□□□□□ -1.46
UFD1P53044 GET4YOR164C 939 nt5.94□□□□□ -1.46
UFD1P53044 NAF1YNL124W 1479 nt5.94□□□□□ -1.46
UFD1P53044 MKK1YOR231W 1527 nt5.94□□□□□ -1.46
UFD1P53044 PPH22YDL188C 1134 nt5.93□□□□□ -1.46
UFD1P53044 MBF1YOR298C-A 456 nt5.93□□□□□ -1.46
UFD1P53044 ACS1YAL054C 2142 nt5.93□□□□□ -1.46
UFD1P53044 HXT15YDL245C 1704 nt5.93□□□□□ -1.46
UFD1P53044 HXT16YJR158W 1704 nt5.93□□□□□ -1.46
UFD1P53044 TUF1YOR187W 1314 nt5.93□□□□□ -1.46
UFD1P53044 ECM38YLR299W 1983 nt5.93□□□□□ -1.46
UFD1P53044 PAC2YER007W 1557 nt5.93□□□□□ -1.46
UFD1P53044 UBP13YBL067C 2244 nt5.93□□□□□ -1.46
UFD1P53044 SLA2YNL243W 2907 nt5.92□□□□□ -1.46
UFD1P53044 PDA1YER178W 1263 nt5.92□□□□□ -1.46
UFD1P53044 HSP12YFL014W 330 nt5.92□□□□□ -1.46
UFD1P53044 MLS1YNL117W 1665 nt5.91□□□□□ -1.46
UFD1P53044 AIM46YHR199C 933 nt5.91□□□□□ -1.46
UFD1P53044 CCP1YKR066C 1086 nt5.91□□□□□ -1.46
UFD1P53044 NTG2YOL043C 1143 nt5.9□□□□□ -1.46
UFD1P53044 snR30snR30 606 nt5.9□□□□□ -1.46
UFD1P53044 CIA1YDR267C 993 nt5.89□□□□□ -1.47
UFD1P53044 TRS31YDR472W 852 nt5.89□□□□□ -1.47
UFD1P53044 CYS3YAL012W 1185 nt5.89□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms