Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.61■■□□□ 1.37
CDK9P50750 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CDK9P50750 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CDK9P50750 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDK9P50750 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDK9P50750 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDK9P50750 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDK9P50750 AC093323.1-202ENST00000635031 2045 ntBASIC23.6■■□□□ 1.37
CDK9P50750 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDK9P50750 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDK9P50750 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDK9P50750 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDK9P50750 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.59■■□□□ 1.37
CDK9P50750 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.59■■□□□ 1.37
CDK9P50750 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDK9P50750 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDK9P50750 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDK9P50750 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.58■■□□□ 1.37
CDK9P50750 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDK9P50750 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
CDK9P50750 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CDK9P50750 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.58■■□□□ 1.36
CDK9P50750 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CDK9P50750 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.57■■□□□ 1.36
CDK9P50750 DUX4L11-201ENST00000611504 1267 ntBASIC23.57■■□□□ 1.36
CDK9P50750 DUX4L12-201ENST00000614593 1267 ntBASIC23.57■■□□□ 1.36
CDK9P50750 DUX4L14-201ENST00000621227 1267 ntBASIC23.57■■□□□ 1.36
CDK9P50750 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CDK9P50750 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDK9P50750 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDK9P50750 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.57■■□□□ 1.36
CDK9P50750 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDK9P50750 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.56■■□□□ 1.36
CDK9P50750 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.56■■□□□ 1.36
CDK9P50750 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.56■■□□□ 1.36
CDK9P50750 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDK9P50750 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDK9P50750 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
CDK9P50750 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CDK9P50750 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDK9P50750 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.55■■□□□ 1.36
CDK9P50750 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDK9P50750 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK9P50750 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK9P50750 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.54■■□□□ 1.36
CDK9P50750 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.54■■□□□ 1.36
CDK9P50750 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK9P50750 AC020928.2-201ENST00000588717 2197 ntBASIC23.54■■□□□ 1.36
CDK9P50750 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK9P50750 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDK9P50750 HLA-V-202ENST00000446817 847 ntBASIC23.53■■□□□ 1.36
CDK9P50750 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.53■■□□□ 1.36
CDK9P50750 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
CDK9P50750 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.52■■□□□ 1.36
CDK9P50750 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDK9P50750 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDK9P50750 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CDK9P50750 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.52■■□□□ 1.36
CDK9P50750 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.52■■□□□ 1.36
CDK9P50750 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.52■■□□□ 1.36
CDK9P50750 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.52■■□□□ 1.36
CDK9P50750 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDK9P50750 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDK9P50750 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDK9P50750 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDK9P50750 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CDK9P50750 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.51■■□□□ 1.35
CDK9P50750 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.51■■□□□ 1.35
CDK9P50750 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.51■■□□□ 1.35
CDK9P50750 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CDK9P50750 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.5■■□□□ 1.35
CDK9P50750 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.49■■□□□ 1.35
CDK9P50750 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.49■■□□□ 1.35
CDK9P50750 MIR3648-2-201ENST00000581792 180 ntBASIC23.49■■□□□ 1.35
CDK9P50750 MIR3648-1-201ENST00000615959 180 ntBASIC23.49■■□□□ 1.35
CDK9P50750 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.49■■□□□ 1.35
CDK9P50750 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDK9P50750 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDK9P50750 AC091060.1-201ENST00000623524 1766 ntBASIC23.48■■□□□ 1.35
CDK9P50750 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CDK9P50750 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.48■■□□□ 1.35
CDK9P50750 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.48■■□□□ 1.35
CDK9P50750 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
CDK9P50750 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDK9P50750 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDK9P50750 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.47■■□□□ 1.35
CDK9P50750 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDK9P50750 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDK9P50750 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.46■■□□□ 1.35
CDK9P50750 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CDK9P50750 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDK9P50750 DUX4L13-201ENST00000554103 1267 ntBASIC23.46■■□□□ 1.35
CDK9P50750 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
CDK9P50750 DUX4L15-201ENST00000611059 1267 ntBASIC23.46■■□□□ 1.35
CDK9P50750 DUX4L23-201ENST00000615195 1269 ntBASIC23.46■■□□□ 1.35
CDK9P50750 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDK9P50750 DUX4L24-201ENST00000617576 1269 ntBASIC23.46■■□□□ 1.35
CDK9P50750 DUX4L22-201ENST00000618238 1269 ntBASIC23.46■■□□□ 1.35
CDK9P50750 DUX4L20-201ENST00000619712 1269 ntBASIC23.46■■□□□ 1.35
CDK9P50750 DUX4L21-201ENST00000622058 1269 ntBASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms